Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00845 ATGGCTTCCCTTGATGGTCAGAAAACTAATGAAACTTCATCGAATCATGTTGAGATTCCTGTTGGTGTGGAGCCAAAAGCAAACCGAGAAATCGTTGAAGAGAGAAACATAGACTATTCCCAGAGGGCGAATTGGGTGCGCGCAGCAGTGTTAGGAGCGAATGATGGTTTAGTCTCGGTTGCATCATTGATGATGGGTGTTGGAGCTGTTAAGGAGCAGATGACAGCGATGCTTCTTGCTGGTTTTGCAGGGTTAATTGCCGGGGCATGCAGCATGGCGATTGGAGAGTTTGTGTCTGTGTACACTCAGTATGACATAGAAATAGCTCAAATGAAAAGAGAGAGAGAAAAGAAGAGTATTGGTGATGGAGTGAGTGAAGAAGCTGAAAGGGAAAAGTTGCCAAATCCATTTCAGGCTGCCGTAGCATCGGCTCTAGCATTTTCTGTGGGTGCAGTGGTGCCATTGCTGTCTGCTGCATTCATAAAAAACCATAAAATAAGACTTGGTGTTGTTGTTACAGTGGCTAGTCTCACATTGGTGGTGTTTGGTGGGTTAGGAGCAGTGCTTGGAAAAACTCCAATCACAAAATCTTGCCTTAGGGTGCTCATTGGAGGTTGGATGGCTATGACTGTAACATTTGGCTTCACCAAGTTATTTTCCTTTGCTGGGATTTGA 675 0.4489 MASLDGQKTNETSSNHVEIPVGVEPKANREIVEERNIDYSQRANWVRAAVLGANDGLVSVASLMMGVGAVKEQMTAMLLAGFAGLIAGACSMAIGEFVSVYTQYDIEIAQMKREREKKSIGDGVSEEAEREKLPNPFQAAVASALAFSVGAVVPLLSAAFIKNHKIRLGVVVTVASLTLVVFGGLGAVLGKTPITKSCLRVLIGGWMAMTVTFGFTKLFSFAGI 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00845 224 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 24 219 IPR008217 GO:0005384|GO:0030026
Vian10g00845 224 CDD Nodulin-21 45 193 - -
Vian10g00845 224 Pfam VIT family 129 216 IPR008217 GO:0005384|GO:0030026
Vian10g00845 224 Pfam VIT family 46 118 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00845 Vian-Chr10 8447527 8448201 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g00845 11 224 Nodulin-like Gene Family AT3G43660 59.813 8.84e-90 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00845 K22736 - gmx:100817158 316.62