Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00834 ATGACGACGACGACAGCAACAACCTTTGATGTCTCCGCCGCTTGTTTTCGTGTTCCTCCTTCGTCTTCTCCTCGTTTCTCACGCAATCCATGCCACACCAGGTTTTCAGTTCTGAACTCCTTGAATCCTCACAGGGGACGGATTAGCGTGAACGTTCCACCCAAGTTTCCAAACTTCCGGAGGGAAGTTGCACTGAAGGGGGATTTGGAGGCTGTTGTTCCAACTTCGGTGCCTGTGCGTGTTGCATATGAACTTCTTCTAGCTGGTCATCGATATTTGGATGTGAGGACCCCAGAAGAGTTTGATGAAGGACACGTTCCTGGCGCAATAAACATACCTTACATGTTCAGAGTTGGATCAGGGATGACGAAGAACAGCAACTTCATTAGAGAGGTATCGTCACATTTTAGGAAAGACGATGAAATTATAGTTGGCTGCCAGCTTGGTAAAAGATCTATCATGGCTGCGAGTGACTTGCTAGCTGCTGGGTTCACAGGACTGACAGACATTGCTGGTGGCTTTGCAGCTTGGACACAAAATGGGCTTCCAACAGAACGATGA 561 0.4813 MTTTTATTFDVSAACFRVPPSSSPRFSRNPCHTRFSVLNSLNPHRGRISVNVPPKFPNFRREVALKGDLEAVVPTSVPVRVAYELLLAGHRYLDVRTPEEFDEGHVPGAINIPYMFRVGSGMTKNSNFIREVSSHFRKDDEIIVGCQLGKRSIMAASDLLAAGFTGLTDIAGGFAAWTQNGLPTER 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00834 186 CDD RHOD 93 177 - -
Vian10g00834 186 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 15, CHLOROPLASTIC 21 185 - -
Vian10g00834 186 Pfam Rhodanese-like domain 92 179 IPR001763 -
Vian10g00834 186 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 75 185 IPR036873 -
Vian10g00834 186 ProSitePatterns Rhodanese signature 1. 101 112 IPR001307 GO:0004792
Vian10g00834 186 ProSiteProfiles Rhodanese domain profile. 86 186 IPR001763 -
Vian10g00834 186 Gene3D - 65 185 IPR036873 -
Vian10g00834 186 SMART rhod_4 76 183 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00834 Vian-Chr10 8330378 8332430 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g00834 76 183 Sulfurtransferasese or Rhodanese AT5G66170 45.455 1.41e-30 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00834 - - gmx:100305968 306.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00834 10 8330378 8332430 Vian1g01852 1 21990569 21992158 PCT