Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00809 ATGAAGTTTCTCTTCCAAAACCTTCTTTCTCATCTTCCTTTAATCATTCTTTGGTCTTTTGCCATTGTTACTCAGCATACCAGTGTTGTGTTGAGTCTTCCAAACAATGAAATTGTGCCAGCAGTTATTGTGTTTGGAGACTCTATAGTAGACACAGGTAACAACAACTTCATCAACACCATTTTCAGATGCAATTTCCAACCATATGGTAAAGATTTTGGTGGAGGGAATCAACCAAGTGGGAGGTTCAGCAATGGTATAATCCCATCAGACATCATTGCTGCAAAATTTGGAGTGAAAAAGATTTTGCCACCTTATCTTGATCCAAAACTGCAACCTCAAGATCTCCTCACAGGTGTAAGCTTTGCATCTGGTGGTTCTGGATATGATCCTCTAACTTCTAAATCAGCATCTGTGCTATCACTGACAGATCAATTGAACAAGTTTAGGGAATACAAGAGCAAGATAGAGGAAATTGTTGGAGAAAATAGAACATCAACAATAGTATCAAAAGGCATATACATATTGTGCACAGGAAGCAATGACATTGCCAATACTTACTCTTTCTCTCCAATTAGGCGAGCACATTATGACATTCCTGCATACACAGACTTAATGACTTCACAAGCCACAAACTTCTTGCAGGAACTTTATGGACTTGGAGCAAGAAGGATTGGAGTGATTGGTTTACCAGCTCTAGGGTGCGTGCCCTCGCAGAGAACAATTAAAGGAGGCTTACTGAGAAATTGTTCAGATTCTGAGAACCAAGCAACAATGCTCTTCAACACAAAACTCTCATCACAAATAGATGCACTGAGTAAAAAAATTTCAGAAGCTAGACTTGTCTACCTTGATATTTACAACCCTTTACTCAAAATGATTCAAAATCCTGCTAAATATGGTTTTGAAGTAGCAAACAAAGGATGCTGTGGCACGGGAAATTTTGAAGCAGGCATACTTTGCAACAGTTTGACGCCACACATATGTTCAAATACCGAAAACTACATTTTTTGGGATAGTTTCCATCCTACCCAAGAGGCATATAATGTGCTCTGTTCTCTGGTGTTGGATAACAAAATCAAGGACTTCTTCTAA 1095 0.3881 MKFLFQNLLSHLPLIILWSFAIVTQHTSVVLSLPNNEIVPAVIVFGDSIVDTGNNNFINTIFRCNFQPYGKDFGGGNQPSGRFSNGIIPSDIIAAKFGVKKILPPYLDPKLQPQDLLTGVSFASGGSGYDPLTSKSASVLSLTDQLNKFREYKSKIEEIVGENRTSTIVSKGIYILCTGSNDIANTYSFSPIRRAHYDIPAYTDLMTSQATNFLQELYGLGARRIGVIGLPALGCVPSQRTIKGGLLRNCSDSENQATMLFNTKLSSQIDALSKKISEARLVYLDIYNPLLKMIQNPAKYGFEVANKGCCGTGNFEAGILCNSLTPHICSNTENYIFWDSFHPTQEAYNVLCSLVLDNKIKDFF 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00809 364 Pfam GDSL-like Lipase/Acylhydrolase 42 351 IPR001087 GO:0016788
Vian10g00809 364 Gene3D SGNH hydrolase 32 359 IPR036514 -
Vian10g00809 364 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 42 53 IPR008265 GO:0006629|GO:0016298
Vian10g00809 364 PANTHER GDSL ESTERASE/LIPASE EXL3 23 352 - -
Vian10g00809 364 FunFam GDSL esterase/lipase APG 31 360 - -
Vian10g00809 364 SUPERFAMILY SGNH hydrolase 173 356 - -
Vian10g00809 364 CDD SGNH_plant_lipase_like 40 358 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00809 Vian-Chr10 8055425 8057381 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g00809 36 359 Pollen Coat Proteome AT1G75910 39.024 5.09e-73 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00809 - - gmx:100810354 608.216