Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00781 ATGATGGAACCTCAACAACCACAAGGGAGCCAACCAAACGACGAGGGTGCCAGTGGAAAAGGGGGCTTTCTCAGCAGGCAAAGTAGTACACGGTGGACTCCCACAACCGACCAGATTAGAATATTGAAGGACCTTTACTACAACAATGGAATTAGATCCCCAAGTGCAGAACAGATTCAGAGGATCTCTGCTAGGCTGAGGCAGTACGGTAAGATTGAAGGCAAGAATGTCTTTTATTGGTTCCAGAACCACAAAGCTCGAGAAAGGCAGAAGAAAAGGTTCACTTCTGATAATGTGCCCATGCAAAGACCTCCTGCCCCATCTAATGCTCTTCCTTGGAAACCTGATCAAGATCCTCCTATTCATACCAACTATTCTAACATTTCTTCTACGGGGATCTCTTCTGCATCATCTTCTTCTGTTGAGATCATTACTGTCGGACAGATGGGGAATTATGGCTATGGTTCTGTGCCCATGGAGAAAAGTTTTAGGGACTGTTCAATATCTGCTGGGGGTAGCAGTGGCCATGTTGGAATAAACCACAACTTGGGATGGGTTGGCGTGGATCCTTATTCCTCACCCTACGCCAACTTCTTTGGAAAAATAAGGCCAACTGAAGAAACCCTGGAAGAAGAACAAGAAGAGGATGGTGCTGCTGAGATTGAAACTCTCCCTTTATTCCCTATGCACGGTGAGGACATTCATGGCTATTGCAACCTCAAGTCTAATAATTCTTACAACTATGATGGAAACGGCTGGTATCATTCTGAAGACGGCTTCAAGAATGGTTCTCGTGCTTCTTTGGAGCTCAGTCTCAACTCCTACACTCGCAGATCTCCAGATTTAGCTTAA 852 0.4542 MMEPQQPQGSQPNDEGASGKGGFLSRQSSTRWTPTTDQIRILKDLYYNNGIRSPSAEQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSDNVPMQRPPAPSNALPWKPDQDPPIHTNYSNISSTGISSASSSSVEIITVGQMGNYGYGSVPMEKSFRDCSISAGGSSGHVGINHNLGWVGVDPYSSPYANFFGKIRPTEETLEEEQEEDGAAEIETLPLFPMHGEDIHGYCNLKSNNSYNYDGNGWYHSEDGFKNGSRASLELSLNSYTRRSPDLA 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00781 283 Gene3D - 24 90 - -
Vian10g00781 283 CDD homeodomain 30 92 IPR001356 GO:0003677
Vian10g00781 283 MobiDBLite consensus disorder prediction 1 15 - -
Vian10g00781 283 SUPERFAMILY Homeodomain-like 23 97 IPR009057 -
Vian10g00781 283 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 9 276 IPR044555 GO:0003700|GO:0099402
Vian10g00781 283 SMART HOX_1 27 95 IPR001356 GO:0003677
Vian10g00781 283 Pfam Homeodomain 29 90 IPR001356 GO:0003677
Vian10g00781 283 MobiDBLite consensus disorder prediction 89 113 - -
Vian10g00781 283 ProSiteProfiles 'Homeobox' domain profile. 25 91 IPR001356 GO:0003677
Vian10g00781 283 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00781 Vian-Chr10 7711450 7712873 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g00781 23 233 Wox Gene Family AT2G17950 45.817 3.81e-55 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Vian10g00781 Homeodomain 1.7e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00781 - - vra:106776674 543.117