Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00776 ATGGCAACCTATAGGAAAATCAAGCCAGCAGCCTTCGCGAGTCCTAACCGCGACATCCAAAGAACCCAGATCGCGAACATTTTCGATTCCGCCGTTTATGCGCTTCACACTGCGTGCTTCACGCTGCACTTTCTATCCAGAAAATCCAAGAAAGACAAAAAGTCTAAACCAAAGAATGATGTGCACAACCAGGTGACCCCTCTTCCTGAGCTAATTGCCGAGCCAACAAATGCAAGATCAGTGTCCTTTGTTGGAACACACGAGTACTTGGCCCCAGAGATCATCAAGGGTGAAGGGCATGGAAGTGTTGTGGACTGGTGGGCATTTGGGATATTCCTGTATGAGCTTCTGTTTGGTAGAACACCATTCAAAGGTCCTGCAAACCGTGCAACTTTGTTCAATGTAATTGGTGAGCCTCTAAGATTTCCAGAATCTCCAACTGTTAGCTTTGTTGCCAGAGATTTGATCAGAGGGGAGGAGCCCTAA 486 0.4712 MATYRKIKPAAFASPNRDIQRTQIANIFDSAVYALHTACFTLHFLSRKSKKDKKSKPKNDVHNQVTPLPELIAEPTNARSVSFVGTHEYLAPEIIKGEGHGSVVDWWAFGIFLYELLFGRTPFKGPANRATLFNVIGEPLRFPESPTVSFVARDLIRGEEP 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00776 161 ProSiteProfiles Protein kinase domain profile. 1 161 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian10g00776 161 PANTHER FLIPPASE KINASE 1-RELATED 38 158 - -
Vian10g00776 161 SUPERFAMILY Protein kinase-like (PK-like) 77 157 IPR011009 -
Vian10g00776 161 Gene3D Transferase(Phosphotransferase) domain 1 77 157 - -
Vian10g00776 161 Pfam Protein kinase domain 80 136 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00776 Vian-Chr10 7642612 7645934 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g00776 7 158 AGC Kinase Gene Family AT5G47750 66.242 1.13e-65 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Vian10g00776 Pkinase 1.5e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00776 K08286 - vum:124836595 247.669