Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00744 ATGTTGCCCGAACGAGCTAATCTGCACATAGCCTTAACCTTTTTGCAATTTTGTTATGCAGGAAATCATATATTTCTGAGAATTGCACTTGATACAGGAGTAAGCAAGCTTATATTTCCTGTCTTTAGAAACATCACCGCCTTGGTTCTTCTGGGTCCACTCGCGTATTTTTCAGAGAAGAAAGATAGGCCATCAATAACCACTTACTGTGTGGTACACTTTTTCCTACTTGGACTTGTTGGAATAACAATGAAAGAAGGATTCTACCTCTTGGGTTTGGAGAAAACTTCACCTACGTTTGCCGCTGCTATGCAGAATTCAGTTCCTGCCCTCACTTTTCTGATGGCTGCACTACTCAGATATGAGAGCGTTCACTTCAATAGAATTGATGGTGTGGCTAAGGTCCTTGGTGTCCTTGCTTCTGTTGGTGGAGCTACAATCATTACCCTTTACAAGGGACCTGTTATTTATTCTCCGCGTTTAGGATTTAATCAGGAACAATACTTGACTATGATGGGGGATACCCCAGGAAAGGACTGGAACTTGGGTGGCATCTATCTCTTCTGTCACTCCTTATGTTGGTCTGGTTGGATTGTGATGCAAGCATTTGTTCTGAAAATATACTCAGCCCCGCTCACAGTTTCTGCATTTACGTGCTTCTTTGGTGTTGTGCAGTTTTTGACAATTGCAGCTTTTTTTGAGAAGGATTCCAAAGCCTGGCAGTTCAATTCTAGTGGAGAGATCTACAGTGTTTTGTTCTCGGGAGTGGTGACTTCAGGGCTGGCATCAGCAATACAGATATGGACTATTGGCAAAGGAGGGCCAGTTCTTGCTTCAATTTATCTACCTTTACAAACATTACTAGTAGCTGTGATGGCATCTATTATTTTCGGTGAAGAATTCTTCTTGGGAGGGATTATTGGAGCATTCTTAATCATATTCGGTTTGTATCTTGTTGTATGGGGAAGAAGTCAAGAAACCAAGACTCTCAGAGAGGTCATAGGCCCCCTTGATTCCAAGAATCACTGGGAAGAAAGAAGTGACGCTTTTTCTCTTAACCAACCGTTGATTACTGCACAAAGCTCTTAG 1089 0.4215 MLPERANLHIALTFLQFCYAGNHIFLRIALDTGVSKLIFPVFRNITALVLLGPLAYFSEKKDRPSITTYCVVHFFLLGLVGITMKEGFYLLGLEKTSPTFAAAMQNSVPALTFLMAALLRYESVHFNRIDGVAKVLGVLASVGGATIITLYKGPVIYSPRLGFNQEQYLTMMGDTPGKDWNLGGIYLFCHSLCWSGWIVMQAFVLKIYSAPLTVSAFTCFFGVVQFLTIAAFFEKDSKAWQFNSSGEIYSVLFSGVVTSGLASAIQIWTIGKGGPVLASIYLPLQTLLVAVMASIIFGEEFFLGGIIGAFLIIFGLYLVVWGRSQETKTLREVIGPLDSKNHWEERSDAFSLNQPLITAQSS 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00744 362 Pfam EamA-like transporter family 16 145 IPR000620 GO:0016020
Vian10g00744 362 Pfam EamA-like transporter family 183 320 IPR000620 GO:0016020
Vian10g00744 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 227 324 - -
Vian10g00744 362 PANTHER WAT1-RELATED PROTEIN 10 327 IPR030184 GO:0016020|GO:0022857
Vian10g00744 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 42 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00744 Vian-Chr10 7276594 7278830 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g00744 2 347 Nodulin-like Gene Family AT1G75500 56.091 1.18e-138 398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00744 - - gmx:100790386 615.15