Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00735 ATGCGCAAACTTCTTCCTTCGTTTGCATCAGCTTCGTCGTGGTTCGAGGTGTACGCTACGTTCTCCACATTCACCATGCTCCTCAGAACTGCATTCAATGATCTCATACCCCACCAAATTCGATCCTTTCTTGTCTCAAAGCTAGAAGCCTTTTTCCATAGCCAACCAAATAATCAAATATCTCTCCGAATCAACGAATTCTGGCACGATCGGTATAATGGAAATGAAGTTTTCCTTGCAGCGCAGGAGTATCTCCCCACCAGGATTACCAGCACCTACAAATCACTCAAAGTTGGTAAACGAGAAAACGAAAAGCACCTGAATCTCGCAGTGGATCCAAGCCAAGAGGTGGTGGACGAGTTTGAAGGCACCAAGTTCACTTGGAAGTTGGATGAGAATTCAGACGAAAACTCGCGCGATTCCTGGAAGCAAGCCTTTGTACTGACCTTCGACGAGAGGAACAGAGAGAGAGTGTTGGATCGGTATATCCCACACGTCCTTAAAACATACGAGGCCATGAAAAGTGAGAAGAGGATTCTGGAAATCCATTCCAGGAGGAGTTACGCATGGACCTACTGGGAGTTATCTCATCCTGCCACATTCGACACGCTGGCCTTGGATCCCGAGTTGAAGCAAGCTGTAGTTGATGATTTAGATCGGTTCCTGAAGAGGAAGGAATTCTACAAGAAGGTGGGAAAGCCTTGGAAACGTGGGTACTTGCTGTATGGACCTCCGGGAACAGGAAAATCTAGCCTCATTGCAGCCATTGCCAATCACTTGAAATTCGACGTGTATGATTTGGATTTATCTTGTATTAATTCTGATTCAGACCTGATGGAAGCCATGAGGGATATATCTGGCAGTTCCATCTTGGTGTTTGAAGACATAGATTGCAACAAAGAGGTGCATGATCGATCAAAACCAAAACAAGATTCAGATATTGAGAAGGAGCGGGGTGAGGGTAGTGGGAAGTTTAGTCTGTCGAATTTGCTGAATTTCATCGATGGTTTAAGGTCAGGCGGTGGAGAGGGGTGGGTTATAATATTCACTACTAACCACAAAGAGAAAATAGACCCGGCGTTGCTGCGCCCTGGTCGCATGGACATGCACATTCACTTGTCCTTTCTCAGAGGTAGGGCGTTTCCGATTATGGCTTCTAATTATTTGGGTATTGAAGGACATCATCCTCTGGTTGAAGAGATCAAAGGAATGTTGGAGAAAACACAAGTCACCCCTGCAGTTGTAGGAGAGCATCTCATCAGAAATGAGGACCCTGACCTTGCTTTGGAAGCACTTGTTGAATTTCTCAAACAACAGATGAAGGAGACTCAATGA 1335 0.4547 MRKLLPSFASASSWFEVYATFSTFTMLLRTAFNDLIPHQIRSFLVSKLEAFFHSQPNNQISLRINEFWHDRYNGNEVFLAAQEYLPTRITSTYKSLKVGKRENEKHLNLAVDPSQEVVDEFEGTKFTWKLDENSDENSRDSWKQAFVLTFDERNRERVLDRYIPHVLKTYEAMKSEKRILEIHSRRSYAWTYWELSHPATFDTLALDPELKQAVVDDLDRFLKRKEFYKKVGKPWKRGYLLYGPPGTGKSSLIAAIANHLKFDVYDLDLSCINSDSDLMEAMRDISGSSILVFEDIDCNKEVHDRSKPKQDSDIEKERGEGSGKFSLSNLLNFIDGLRSGGGEGWVIIFTTNHKEKIDPALLRPGRMDMHIHLSFLRGRAFPIMASNYLGIEGHHPLVEEIKGMLEKTQVTPAVVGEHLIRNEDPDLALEALVEFLKQQMKETQ 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00735 444 Pfam ATPase family associated with various cellular activities (AAA) 240 373 IPR003959 GO:0005524|GO:0016887
Vian10g00735 444 SMART AAA_5 235 377 IPR003593 GO:0016887
Vian10g00735 444 Pfam Domain associated at C-terminal with AAA 36 130 IPR025753 -
Vian10g00735 444 PANTHER BCS1 AAA-TYPE ATPASE 19 441 - -
Vian10g00735 444 Gene3D - 372 443 - -
Vian10g00735 444 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 112 422 IPR027417 -
Vian10g00735 444 Coils Coil 433 444 - -
Vian10g00735 444 Gene3D - 191 371 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00735 Vian-Chr10 7144634 7145968 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g00735 237 373 Calmodulin-binding Proteins AT3G56690 31.034 1.99e-12 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00735 - K08900 gmx:100789094 585.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00735 10 7144634 7145968 Vian10g00735 10 7144634 7145968 ECH