Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00723 ATGTGGCGGTACGGCGGTGCGGCAGTGTGTGCGGTGGTCACTGGTGCTTCGTTTCTGCGTCTTGGGTCTACGAGAGGTGCAGCTGCAGAAAGCATTTATAACAGGGGTCCCCAAGTTGAATCAGGTAGAGCTGGAGACACTGAAAAGAAACAGGAAAAGGGTGACTCTATCTACGATGAACCCCTTGAGTGTAGAATTGCTAAGCTTGTTGGATTACTTGAAGCTGGAATGAAACAGGAAAGGGGTGACTATCCCTCTAGTGATGAATTATTGGCTGCTGGATTTTTGATTGGGTTGATTTGGCTTTATTACTTCACTGGTCATGTTACTCCAAACTCAACTAAGAAGGGACGTAGTGGCTATGAGCCATCGGACACTGAGACCGAGTGGCAAGAGATTCCACGCCACGAACGAGAAAGAAGAAACTTCATTCTACAACGGAACAAGAGCCCCATGGCACCACACAGGAGGCACCCTTCCAGGGTTGAACATGAAATCTCATCAGCTTCAACAACTTCAGCTCCACGTAGAAGACACAATAGCAAATCACCCTATAAGCTCCACGTAGCAGAAGATGTTGCTGCTTCATCATCGCCCGTAACAGGTTTGGATACACGAAGAAATATCAGTCCCTTGCCGAGACCTGACCTTGGAAGAACTTTGTCCCCTTTCAGGGAGCAAAGAACTGAGAAGCCACACTACAAGAGATCAGTGACTGCTCCCAGGTTGAGGATTCAAGAGAGCAACCATGGAGGGATAATCAATGACACTGTTCTAAAGCAAAGAGAAGCTTCTCCTTTCAAAGCGCCTTCGGTTGGAAAAATCAACGAAATGATAGCCCAGGTGAAGCTATCCAATGATCCCAGAAGTGATTATTCATCGGTGCTTGAAAGCACTGATTCCATTCAACCCGGTGACCTTTTCTTTTCTCGTGAATGCAATGCCTATGAAGGGAGGAATTCTTCGTTGCCGAAACGCATCCAACAGAGTGAGTATTTCGGTCCAATGCCAACGGTGAACTCCGCGAGAACACCATCTGAAAGCAAAGGAAATAACGGTGATCTTAACATGAATATGAATATGTTGTCTCAATCAACCACGGGTTTGAGTTCTGCTGCCACGAGTAGAAAGGGAAGTGTCACTGGTAAGACAAGTAGTGTAACAAGCGAGGGTAGTGGAAAGACGACCGCAAGCATGAGGAAATTCACAGCTAACAGAAAAAAGAACCAGAAAGATACATGGTTTGCTTGCATGAGAACAGGTAACTGTAGAACCACTAGAAAATCTCCTGAACGTCGACCCATTGACGAATCTTCTTACATTGAGAGAGCAGTGGTGTCTCATGGCTCTTGCCCTCATATTCTGCTCAAAGGACCCTCTGGTTCCGGAAAAAGAGAGCTAGCGATGGCTCTTCTTAGAGAAATATATGGTGATGCATGTTATAATCTGTCTCATGATTTAAGACACTTCCCTATTCAGGACCAAAGGCTTAAGAAAGTCTCTGTACCCATAACATCCAGTCCTCATCACATGGAGCTTGATGTAAATTCAGAACCAAATGCTAAATATGCTTTAATGGGACTAATCAAAGAAATAAGCAATATATATGCTATTGCCCCTGAAGTAAGCAATATTAATTTCAAGTCAGATTTTAAAGTAATAGTTCTTTATGATGTCCACAAAGCTGTAGATAACATTCAGCACATTATCAAATGGATAGTAGACCGCTATTCTGATATATGCAAATTAGTACTCTGCTGTGAAGATGATGCAGACATCATTGATGCTGTGAAAAATCGGTTCAAAACGGTACAAGTTGATGCTCCTCAAACTCACGAAGTTGTTGAGGTTCTTATGCAGATAGCAAAGAATGAGAAATTTGATCTGTCCATGAACTTTGCTGCGAAGATTGCTACAAAATCTAAGCAGAACCTCAGAAAAGCAATCATGGCTCTGGAAGCATGCAAAGCACACAACTATCCATTTTCAGAAGAACAACCAATTTCAGTTGTATGGGAGGAGATCGTAATAGAAGTTGCCACAGAGATCCTAGCTGATCCATCATATTCACGGCAAGAAATTTCTCTATCTTATGTTACTCTCAGTTCGAGGGAAATTTCAAATGCTTCTCTTGGATTTTGTCCAGCCGAAATTGATTCTCCTGGACAGAAGACTCCCACCAGGAATAACAGCTTTACTAAAGTTAGAAGAATTTGTGGCCAAGTTCATGAGCATGTACAGAAAAAACTCTGGCAATCGGCAATATGTGTAGTCGATATGGCTCACCATGAAGATTCAAGTGCATGGAATTCGGATTTACCTCACCCAAAGCTTAATGAAAGAATACTTTCTTCTCTGTCACGGAGAACTGTTGCTGCTCACCCCTGGCACGACTTAGAGATTGGGCCAGGAGCTCCGTCTGTTTTCAACTGTGTGGTTGAAATTGGCAAAGGCAGTAAGGTCAAGTATGAGTTGGACAAGAAAAGTGGACTTATAAAGGTTGATCGAGTTCTTTACTCATCTGTTGTCTACCCGCACAACTATGGTTTTATCCCAAGAACCATTTGTGAAGACAGTGATCCCATGGACGTGCTGGTTCTGATGCAGGAGCCCGTGCTTCCTGGTACCTTCCTTCGTGCTCGCGCTATAGGACTAATGCCCATGATTGACCAGTGTTATGGCACTTGTGCTGCTCGGCTCTAG 2703 0.4377 MWRYGGAAVCAVVTGASFLRLGSTRGAAAESIYNRGPQVESGRAGDTEKKQEKGDSIYDEPLECRIAKLVGLLEAGMKQERGDYPSSDELLAAGFLIGLIWLYYFTGHVTPNSTKKGRSGYEPSDTETEWQEIPRHERERRNFILQRNKSPMAPHRRHPSRVEHEISSASTTSAPRRRHNSKSPYKLHVAEDVAASSSPVTGLDTRRNISPLPRPDLGRTLSPFREQRTEKPHYKRSVTAPRLRIQESNHGGIINDTVLKQREASPFKAPSVGKINEMIAQVKLSNDPRSDYSSVLESTDSIQPGDLFFSRECNAYEGRNSSLPKRIQQSEYFGPMPTVNSARTPSESKGNNGDLNMNMNMLSQSTTGLSSAATSRKGSVTGKTSSVTSEGSGKTTASMRKFTANRKKNQKDTWFACMRTGNCRTTRKSPERRPIDESSYIERAVVSHGSCPHILLKGPSGSGKRELAMALLREIYGDACYNLSHDLRHFPIQDQRLKKVSVPITSSPHHMELDVNSEPNAKYALMGLIKEISNIYAIAPEVSNINFKSDFKVIVLYDVHKAVDNIQHIIKWIVDRYSDICKLVLCCEDDADIIDAVKNRFKTVQVDAPQTHEVVEVLMQIAKNEKFDLSMNFAAKIATKSKQNLRKAIMALEACKAHNYPFSEEQPISVVWEEIVIEVATEILADPSYSRQEISLSYVTLSSREISNASLGFCPAEIDSPGQKTPTRNNSFTKVRRICGQVHEHVQKKLWQSAICVVDMAHHEDSSAWNSDLPHPKLNERILSSLSRRTVAAHPWHDLEIGPGAPSVFNCVVEIGKGSKVKYELDKKSGLIKVDRVLYSSVVYPHNYGFIPRTICEDSDPMDVLVLMQEPVLPGTFLRARAIGLMPMIDQCYGTCAARL 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00723 900 MobiDBLite consensus disorder prediction 32 55 - -
Vian10g00723 900 MobiDBLite consensus disorder prediction 120 145 - -
Vian10g00723 900 MobiDBLite consensus disorder prediction 112 236 - -
Vian10g00723 900 SUPERFAMILY Inorganic pyrophosphatase 789 891 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Vian10g00723 900 ProSitePatterns Inorganic pyrophosphatase signature. 858 864 - -
Vian10g00723 900 Gene3D Inorganic pyrophosphatase 790 893 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Vian10g00723 900 PANTHER INORGANIC PYROPHOSPHATASE 749 891 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Vian10g00723 900 Gene3D - 611 668 - -
Vian10g00723 900 Pfam Inorganic pyrophosphatase 811 891 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Vian10g00723 900 FunFam replication factor C subunit 3 610 668 - -
Vian10g00723 900 MobiDBLite consensus disorder prediction 221 236 - -
Vian10g00723 900 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 445 656 IPR027417 -
Vian10g00723 900 MobiDBLite consensus disorder prediction 365 398 - -
Vian10g00723 900 CDD pyrophosphatase 808 891 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Vian10g00723 900 Gene3D - 433 609 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00723 Vian-Chr10 7021329 7033909 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g00723 443 688 Core DNA Replication Machinery Family AT5G27740 36.948 2.94e-45 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00723 K10756 - gmx:100795321 952.199