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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Vian10g00693
ATGGCGGAGGAGGAAGCGAAGTTACTTAATGCTAGGATAAAGGAAGAGGAGGTTCAGTGCGAGGAGGCACCTGACCTCAACGACACACAGTTTAACAAATTGGATGAGCTTTTGACTCAGACCAAGCTGTACTCCGAATTTTTGCTGGAGAAAATGGATGACATCACACTTAATGTGGGTGAACAAGTGAAAATGGAAGAGCAAGAGAGCAATCCTTCTGCAAAGAGGGGTAGGGGATCGAAAAGAAAAGCTGCTTCCCAGTGCAATACTAGGAGGGCCAAAAGGGCAGTTGCTGCCATGCTGACAAGATCTAAAGAAGGTGAGGGGACTGTAGATATGAAAATGACTGAGGAAGAAAGAGTTGAGAAGGAGCAGAAAGAGCTCATGCCTTTACTGACAGGGGGAAAATTGAAGCCTTATCAACTAAAGGGTGTAAAGTGGTTGATTTCCTTGTGGCAAAATGGATTGAATGGAATTCTTGCTGATCAAATGGGTCTTGGAAAGACAATCCAAACTATTGGATTTCTCTCACATCTAAAAGCGAAAGGTCTGGATGGGCCATACATGATAATTGCTCCTCTATCAACCCTTTCAAACTGGGTGAACGAGATTTCTAGGTTTGCACCATCACTTCCTACAATTATCTACCATGGTGACAAGAAGGAGAGAAATGAGATCCGAAGGAAATACATGCCTAGAACAATTGGCCCAAAATTTCCCATAGTCTTAACTTCTTACGAGGTTGCATTAAATGATGCCAAGAAATATTTTAGGCCATACAGTTGGAAATATCTCGTTATTGATGAGGGACACAGGCTCAAAAATTCACAATGCAAATTAGTAAAGGCATTGAAATACTTAACTGTTGAAAACAAGCTTCTTCTAACTGGAACTCCACTTCAGAACAACTTGGCCGAACTATGGTCTCTATTGAACTTCATTTTGCCTGATATTTTTGCATCCCTTGAAGAGTTCGAGTCATGGTTTAATTTGTCAGCGAAGGGCAATAATGAAGCAACCAAGGAAGAACTAGAAGAGAAACGAAGATCCCAAGTAGTAGCAAAGCTCCATGCTATTCTTCGACCCTTTCTTCTGCGTAGGATGAAGTCTGATGTGGAGATTATGTTGCCAAAGAAAAAAGAGATTATTATCTATGCAAACATGACCGACTATCAGAAGAAGTTGCGGGATCATTTAGTTAATAAGACGTTGGGAAACTATTTAAAAGAAAAAATGTCAAGCGGACGCCCTTTTCCTGCAAGTGCGCTTCGTAATTTGGCTATTCAGCTTAGGAAAGTGTGTAACCATCCCGATCTTATAGATCCAGACTGTGATCATACATATTTATATCCTCCTGTAAATGAAATAGTTGAACAGTGTGGAAAATTCCATTTGCTTGATCGATTGGTGCAACGTTTATTTGCAAGGAATCACAAAGTTCTTGTCTTCAGTCAGTGGACTAAAGTGTTAGATATAATAGATTATTATTTTAGTGAAAAAGGCTTTGAAGTTTGCAGGATTGATGGTTCTGTGAAACTGGATGATAGGAAACGACAGATCCAGGACTTCAACGATGAAAATAGCAATTGCAGAGTTTTTCTTCTTTCTACTAGGGCTGGTGGATTGGGAATCAACCTTACTGCAGCTGATACTTGCATTCTTTATGACAGTGACTGGAATCCTCAGGTGGATTTGCAGGCCATGGATAGGTGTCATAGAATTGGTCAAACAAAGCCTGTTCATATCTACCGGCTGTCAACTGCTCAATCCATAGAGGATCGCATGTTGAAAAGGGCTTTCAGCAAATTGAAGCTTGAGCATGTGGTGATTGGGAAAGGACAGTTTCATCAAGAGCGTAAAGCTGTCAATACTGATCAGATAGAGGAAGAGGATGTTTTGGCATTGCTTCGTGACGATGAAACAGATGAAGATAAAATGATACGAACAGATATTAGTGATGAAGACCTGGAGAAGCTCATGGATCGCAGTGATCTTATCGTCAACAACTCAGACGAACCTCCATGCAGTTCCTTTCCTCTTAAAGGTCCAGGGTGGGAGGTGGTGATTCCAACTGCGACTGGAGGTGTACTCTCTACTCTCAACAGCTAG
2109
0.413
MAEEEAKLLNARIKEEEVQCEEAPDLNDTQFNKLDELLTQTKLYSEFLLEKMDDITLNVGEQVKMEEQESNPSAKRGRGSKRKAASQCNTRRAKRAVAAMLTRSKEGEGTVDMKMTEEERVEKEQKELMPLLTGGKLKPYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLSHLKAKGLDGPYMIIAPLSTLSNWVNEISRFAPSLPTIIYHGDKKERNEIRRKYMPRTIGPKFPIVLTSYEVALNDAKKYFRPYSWKYLVIDEGHRLKNSQCKLVKALKYLTVENKLLLTGTPLQNNLAELWSLLNFILPDIFASLEEFESWFNLSAKGNNEATKEELEEKRRSQVVAKLHAILRPFLLRRMKSDVEIMLPKKKEIIIYANMTDYQKKLRDHLVNKTLGNYLKEKMSSGRPFPASALRNLAIQLRKVCNHPDLIDPDCDHTYLYPPVNEIVEQCGKFHLLDRLVQRLFARNHKVLVFSQWTKVLDIIDYYFSEKGFEVCRIDGSVKLDDRKRQIQDFNDENSNCRVFLLSTRAGGLGINLTAADTCILYDSDWNPQVDLQAMDRCHRIGQTKPVHIYRLSTAQSIEDRMLKRAFSKLKLEHVVIGKGQFHQERKAVNTDQIEEEDVLALLRDDETDEDKMIRTDISDEDLEKLMDRSDLIVNNSDEPPCSSFPLKGPGWEVVIPTATGGVLSTLNS
702
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Vian10g00693
702
FunFam
Chromatin complex subunit A 106
377
606
-
-
Vian10g00693
702
Coils
Coil
1
21
-
-
Vian10g00693
702
ProSiteProfiles
Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile.
149
317
IPR014001
-
Vian10g00693
702
Gene3D
-
105
366
IPR038718
-
Vian10g00693
702
ProSiteProfiles
Superfamilies 1 and 2 helicase C-terminal domain profile.
465
633
IPR001650
-
Vian10g00693
702
Pfam
Helicase conserved C-terminal domain
468
575
IPR001650
-
Vian10g00693
702
MobiDBLite
consensus disorder prediction
63
89
-
-
Vian10g00693
702
CDD
SF2_C_SNF
451
585
-
-
Vian10g00693
702
Gene3D
-
373
672
IPR027417
-
Vian10g00693
702
SUPERFAMILY
P-loop containing nucleoside triphosphate hydrolases
118
367
IPR027417
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Vian10g00693
Vian-Chr10
6681308
6686354
Transposed
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Vian10g00693
123
624
RAD5 or RAD16-like Gene Family
AT3G16600
24.138
1.84e-32
131
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TR
SNF2
Vian10g00693
SNF2_N
4.6e-64
CL0023
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Vian10g00693
K19001
-
gmx:100777687
1214.91
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Vian10g00693
10
6681308
6686354
Vian10g00693
10
6681308
6686354
ECH
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