Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00685 ATGAAACAAGCAGCTGCAAAGTCATCCCTGAGGAGGCTTTGTCCGAACATCGATAGAGAAGATGGGTTGGTGACCGTTCTTGAAATTCCAATACCCGAAGAAATGTTCACACCCATGGGAAGCAACGTAACGTTGCGGTGGCAAAACATGTTAACGTGGATGAAGGCTCAAACAGAAGACAAATTATCCACCCCTACAGTTTCAGCGCGCTTAAATGAGCTTCGTTTTCTCCTTTACCTCGTTGGCTCTCCTCTTATCCCTCTTCAGGTCCAATTAGGTCATTCCGTCCGTCGTCCGGTCAGAGATTGTTCTATTGAAGCATCAACGGCAAAGTATATAGTACAACAGTATATAGCGGCAACGGGAGGACAACCAGCATTGAATGCGGTGGATAGTATGTGTGTTCTTGGGCAGATAAAGATTGTTGCGTCAGATTTTCACCAGACTTGTGAAACCGTTGAGGTGAAGAAAACCTCGGAAGAGATGGGAGGGTTCGTTTTGTTGCAAAAGGACCCCGATTTGTGGTGTTTAGAGATTCTTGTGTCAGGGTGCAAGGTTTCTTGCGGTAGCAATGGCAAGGTCTCTTGGCGCCATTCCTCTAACCAGCAGACACCAATTTCAAGAGGTGCTCCTAGACCTCTACGTCGTTTCCTTCAGGGATTGGATCCAAGGGCAACGGCTAACTTATTTTTGGACGCGGCATGCATAGGAGAGAAGATAATCAATGATGAAGAGTGCTTCATCTTGAAATTGGAAACAAGTCCAGCAATTCGTGATGCCCAAAGCGGACCAAACTTTGAGATTATCCACCACACAATATGGGGCTATTTTAGCCAGCGATCTGGTCTCTTAGTTCAGTTCGAAGATTCAAGATTACTGACGATGAGAACCAAAGAAGACAACGACATTTTTTGGGAAACAAGTTTAGAATCAGTGATTGAGGATTACAGGTACGTAGATGGGATAAACGTATCACACAGTGGGAAGACTCGAGTTACAGTTTCCAGATACGGTGAACAATCAGCTAACCATAAAAGAGAATTGGAAGAGAGATGGAAGATCGAAGAGGTAGATTTTAATGTCTGGGGTTTGAATGCTGAAAGCTTTCTACCTCCTTCAAACTTAGGAAAGACATAA 1137 0.4442 MKQAAAKSSLRRLCPNIDREDGLVTVLEIPIPEEMFTPMGSNVTLRWQNMLTWMKAQTEDKLSTPTVSARLNELRFLLYLVGSPLIPLQVQLGHSVRRPVRDCSIEASTAKYIVQQYIAATGGQPALNAVDSMCVLGQIKIVASDFHQTCETVEVKKTSEEMGGFVLLQKDPDLWCLEILVSGCKVSCGSNGKVSWRHSSNQQTPISRGAPRPLRRFLQGLDPRATANLFLDAACIGEKIINDEECFILKLETSPAIRDAQSGPNFEIIHHTIWGYFSQRSGLLVQFEDSRLLTMRTKEDNDIFWETSLESVIEDYRYVDGINVSHSGKTRVTVSRYGEQSANHKRELEERWKIEEVDFNVWGLNAESFLPPSNLGKT 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00685 378 PANTHER LIPASE 11 375 IPR006873 -
Vian10g00685 378 Pfam Protein of unknown function (DUF620) 133 372 IPR006873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00685 Vian-Chr10 6580056 6581517 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00685 - - gmx:102664990 703.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00685 10 6580056 6581517 Vian10g00685 10 6580056 6581517 ECH
Vian5g01498 5 37547246 37549489 Vian10g00685 10 6580056 6581517 ECH