Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00649 ATGGCTGCCTTGTTTGTTTCTCTTTCTCTCCGTGCCCAGATTCTTTATGTTGTACTCATGTTTTTCACTTGTATTGCAGCTCAATCACAACAGACCAATGGAACAAACTTTTCATGCCCTTCCGATTCACCTCCTTCGTGTGAAACCTATGTGACATACATAACCCAGTCTCCAAATTTTTTGAGTGTGACCAGCGTATCTAATATATTTGACACGAGTCCTTTGTCAATTGCAAGAGCCAGCAACATAGAGAATGAGGAAGACAAGTTGATTCCAGGCCAAGTCTTGCTGATACCAGTAACCTGTGGTTGCACTGGAAACCGCTCTTTCGCCAATATCTCCTATGAAATCAACCCAGGCGATAGCTTCTACTTTGTTGCAACCACTTCATACCAGAATCTCACAAATTGGCATCTAGTGATGGATTTAAACCCCACTCTAAGTCCATATACTTTGCCAGTAGGCATCCAAGTTGTAATTCCTTTATTTTGCAAGTGTCCTTCAAAGAACCAGCTTGACAGAGGGATAAAGTACCTGATCACTCACGTGTGGCAGCCCAATGACAATGTTTCCCTCGTAAGCAACAAGTTTGGTGCATCACCAGAGGACATATTAAGTGAAAACAACTATGGTCAAAACTTCACTGCTGCAAACAACCTTCCAGTTTTGATCCCAGTTACACGCTTGCCAGATCTTATTCAATCTCCTTCAGATGGAAGAAAACACAGAATTGGTCTTCCAGTTATAATTGGTATCAGTCTGGGATGCACACTACTGGTTGTGGTTTCAGCAATATTACTGGTGTATGTATATTTTCTGAAAATGAAGAGTTTGAATAGGAGTGCCTCATCAGCTGAAACTGTAGATAAACTACTTTCTGGAGTTTCAGGCTACGTAAGTAAGCCTACCATGTATGAAACTGGTGCAATCTTGGAAGCTACCATGAACCTCAGTGAGCAGTGCAAGATTGGGGAATCAGTGTACAAGGCTAACATAGAGGGTAAGGTTTTAGCAATAAAAAGATTCAAGGAAGATGTCACGGAGGAGCTGAAAATTCTGCAGAAGGTGAGTCATGGAAATCTGGTGAAACTAATGGGTGTCTCATCAGACAATGATGGAAATTGTTTTGTGGTTTATGAATATGCAGAAAATAGGTCTCTTGAGGACTGGCTTTTCGCCAAGTCTTGTTCAGAGACATCAAACTCAAGGACCACGCTTACATGGTGCCAGAGGATAAGCATAGCAGTGGATGTTGCAATGGGTCTGCAGTACATGCATGAACATGCTTATCCAAGAATAGTCCACAGGGACATCACCAGCAGTAATATCCTTCTTGACTCTAACTTCAAGGCCAAGATAGCAAATTTTTCCATGGCCAGAACTTTTACCAACCCCATGATGTCAAAAATAGATGTATTTGCTTTTGGGGTGGTTCTGATAGAATTACTTACTGGCAAGAAAGCCATGACAACCAAAGATAATGGTGAGGTGGTTATGCTGTGGAAGGACATTTGGAAGATCTTTGATCAAGAAGAGAATAGAGAGGAGAGGCTCAGAAAATGGATGGATCCTAAGTTAGATAATTATTATCCTATTGATTATGCTCTCAGCTTGGCCTCCTTGGCAGTGAATTGTACTGCAGACAAGTCTTTGTCCAGACCAACCATAGCAGAAATTGTACTTAGTCTCTCCCTTCTCACTCAACCATCTTCCTCTACACTGGAGAGATCCTTGACTTCTTCTGGATTAGATATAGAAGCTACTCAAATTGTCACTTCCATCGCAGCTCGTTGA 1794 0.4169 MAALFVSLSLRAQILYVVLMFFTCIAAQSQQTNGTNFSCPSDSPPSCETYVTYITQSPNFLSVTSVSNIFDTSPLSIARASNIENEEDKLIPGQVLLIPVTCGCTGNRSFANISYEINPGDSFYFVATTSYQNLTNWHLVMDLNPTLSPYTLPVGIQVVIPLFCKCPSKNQLDRGIKYLITHVWQPNDNVSLVSNKFGASPEDILSENNYGQNFTAANNLPVLIPVTRLPDLIQSPSDGRKHRIGLPVIIGISLGCTLLVVVSAILLVYVYFLKMKSLNRSASSAETVDKLLSGVSGYVSKPTMYETGAILEATMNLSEQCKIGESVYKANIEGKVLAIKRFKEDVTEELKILQKVSHGNLVKLMGVSSDNDGNCFVVYEYAENRSLEDWLFAKSCSETSNSRTTLTWCQRISIAVDVAMGLQYMHEHAYPRIVHRDITSSNILLDSNFKAKIANFSMARTFTNPMMSKIDVFAFGVVLIELLTGKKAMTTKDNGEVVMLWKDIWKIFDQEENREERLRKWMDPKLDNYYPIDYALSLASLAVNCTADKSLSRPTIAEIVLSLSLLTQPSSSTLERSLTSSGLDIEATQIVTSIAAR 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00649 597 Pfam LysM domain 63 99 IPR018392 -
Vian10g00649 597 SUPERFAMILY Protein kinase-like (PK-like) 314 563 IPR011009 -
Vian10g00649 597 Gene3D Transferase(Phosphotransferase) domain 1 467 582 - -
Vian10g00649 597 ProSiteProfiles LysM domain profile. 51 98 IPR018392 -
Vian10g00649 597 Pfam Protein tyrosine and serine/threonine kinase 341 463 IPR001245 GO:0004672|GO:0006468
Vian10g00649 597 Gene3D Transferase(Phosphotransferase) domain 1 382 466 - -
Vian10g00649 597 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 15 571 - -
Vian10g00649 597 ProSiteProfiles Protein kinase domain profile. 285 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian10g00649 597 Gene3D Phosphorylase Kinase; domain 1 294 381 - -
Vian10g00649 597 ProSitePatterns Tyrosine protein kinases specific active-site signature. 433 445 IPR008266 GO:0004672|GO:0006468
Vian10g00649 597 FunFam Os07g0541700 protein 382 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00649 Vian-Chr10 6244379 6246172 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g00649 81 566 Receptor kinase-like Gene Family AT3G21630 30.755 3.68e-68 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Vian10g00649 PK_Tyr_Ser-Thr 1.7e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00649 - - vra:106777834 1140.18