Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00625 ATGTCATTTTCGTTGTTCGCCACGCCGCAGCAGCAACATCAACCACAACCGCAGCAGTCTCCTTTTCAACCACAGCAAACTAGTCTGTTCCTTCCGCAGCAGCAGCAGCAGTTTCAACCACAACAACAGCAGCAGCCACATCAGCCACAACAGCAGTTGTTTTTGTTCACTAACGATAAAACACCCGCTAGTTATAGTACCAATTGGGCGGATCTACATCCTGACTCCCAGAAGATTCTCCTTCAGATAGAGGAGCGGATATTGGAGTATAGGGATGAAAGCCAGAGACTAGATCAGTGTAGTCGTCTTTATGATTCTTCTGTTTCCAACGATGGCTTTGAGCTTGACGCGGGCCATATTGTTCAGGAACTTGGTGGAATTAGCACTGGCATGGAACGACAAAAGACTTTGTTGCAGGAACTGATGTCCACTGTTAAGGAAATGCTACGCAATACAGAGGTTGCTGTTCGTTCCTTTATGATACTACGCCCCAGGTTCCTTCATCCCAGTGGGGGTTCATCAAGTGCCACTGCCCCATCACAGACTCCTGGAGCGACTATAGCACCTGGCTCAAGTGGCCAACCGATAAATGCATCTATAATGCCTGTTTTTGATTTCTACAGTGGTCTTCCAAAGAAACCATCTCCATTTTTACAGCAAACAATTTTAAGATTTGAGAAGTATCTTGGCGAGTGCCATCAGTGGATTGAAGAGTTAGAGCAGCTGCTTCTTTTGGACTCTGAGAGAAATGCTTCCAGTAACGGATCTTCATTACTACAATCTCTTCCCAAGGTCATGACAAATGTGCATGACTTTTTTGTTCATGTGGCTGCGAAGGTGGAGAGCATTCATCAGTTCATTGAATCTATGAAATCATCATACCTAGCTGATCAGCGTCACCGGGGGGAGGTGAATGACCCGTTTTTGGAGGCAGATAGGCGAGAAACTGCTAGACAAGAAGCTGCCTCAAAAAGAGTTCATCCAACATTACATTTACCTGCAAATCCACAACCCTCAACTCAAGTTGCTGGGTTGTTTTCCAGTTCAGGGACTCAAGCAGCATTGCCTGCCCCACAGACATCTGCAGCAACTACATCATTGTCATCAGGAAGTGGATTCTCTCTTTTTAGTACACCATCCTCTGCTCCATCGTCTTCTGCGTTGTCATCTCTATTTACGACACCAACTCCTGCTCCAGGACCTCAAACCTCACTTTTTGGTTCTGCAACATCTGTACCTGGCCAGGCATCAACTCCCTCTCTGTTCGGTAATACCACTCCATTGTTTAGTTCAACCCCAGCCACAAATTCACTCTTTTCAACTCCATTTGGTTCAGGCGCTGCAACAGGATCTGGGGCTAGCTTTGGACCTGGATCGAAAAATCCACGGGCGAAATCCAGAACTGCTCGACGCTGA 1416 0.4661 MSFSLFATPQQQHQPQPQQSPFQPQQTSLFLPQQQQQFQPQQQQQPHQPQQQLFLFTNDKTPASYSTNWADLHPDSQKILLQIEERILEYRDESQRLDQCSRLYDSSVSNDGFELDAGHIVQELGGISTGMERQKTLLQELMSTVKEMLRNTEVAVRSFMILRPRFLHPSGGSSSATAPSQTPGATIAPGSSGQPINASIMPVFDFYSGLPKKPSPFLQQTILRFEKYLGECHQWIEELEQLLLLDSERNASSNGSSLLQSLPKVMTNVHDFFVHVAAKVESIHQFIESMKSSYLADQRHRGEVNDPFLEADRRETARQEAASKRVHPTLHLPANPQPSTQVAGLFSSSGTQAALPAPQTSAATTSLSSGSGFSLFSTPSSAPSSSALSSLFTTPTPAPGPQTSLFGSATSVPGQASTPSLFGNTTPLFSSTPATNSLFSTPFGSGAATGSGASFGPGSKNPRAKSRTARR 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00625 471 Coils Coil 131 151 - -
Vian10g00625 471 MobiDBLite consensus disorder prediction 305 325 - -
Vian10g00625 471 Gene3D - 213 303 - -
Vian10g00625 471 MobiDBLite consensus disorder prediction 333 419 - -
Vian10g00625 471 MobiDBLite consensus disorder prediction 1 50 - -
Vian10g00625 471 MobiDBLite consensus disorder prediction 433 456 - -
Vian10g00625 471 MobiDBLite consensus disorder prediction 170 192 - -
Vian10g00625 471 PANTHER NUCLEOPORIN P58/P45 NUCLEOPORIN-LIKE PROTEIN 1 6 459 IPR024882 GO:0005643|GO:0006913|GO:0008139|GO:0017056
Vian10g00625 471 MobiDBLite consensus disorder prediction 433 471 - -
Vian10g00625 471 MobiDBLite consensus disorder prediction 305 419 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g00625 53 471 NAC Transcription Factor Family AT4G37130 63.256 8.22e-176 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00625 K14307 - gmx:100776992 699.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00625 10 5984059 5988100 Vian10g00625 10 5984059 5988100 ECH