Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00611 ATGCGTTGGTTACCCACCCTCATCTTCTCCCATTCCCATTCATCCTCTTCACCGTCAACCTCACCGTCGTCGTCGTCGTCGTCTTCGGCCACTCGCAAATCCTCCTCTCCCACCTCATCTACCGTGTCCCACGCCAGGAAGCACACCCGCTCTGCCTGGTTCTTCGGCGGCACCAGAAAGTCGACGCGCTCAAGGAAGCTGAGCCACGTGGAGGACATAGACGCCGTCGTCATCACCCCCTTGTCGCGCTCCACCAGCACCTTCGATCTTTCCTCCGCCCCCTCCTTCGGACCTCAGCCGTTACCCTTGCCCAGAGCCATCGACTCCCGTTTACCCTCCTCCAAAGATGTCGCCGCCGAAAAACCCAATGCCGCCGTCGACAAACCCAATGCCGCCGTCGATTTTACCCTCCCCGCTGGTTTTCAAATGCGCAGTGTATTCGCGAGGGAAGAGAATAGAAAAAATATGGAGCACGTGGAGACAAAGTCACCAAGGGTGGCGCCTCAGCAAGACACGAGCAGTGGTGCAAGTACAAGTGCTCAAGGAGATAACTTCTGGTTGAGTGCTCCTGCAAGAAGTGCTCCAACTAGTCCTTTTGCCAGTCCCAGAATCATCCCAAACATTGCCAAAACCGATGATTTTGTCCCGTACTATTATGTGTCACCCAAAGCCAACCAATTCTGGTCTGCACCAGAGATGCCAACATCCGACCCTTCAGCTGGGCACCCACCTCCTGCTTTCTTTGATTTATCAGCACTGCGCACTGATACCACCCTTTCTCCTCCCCATCAAAGCCCGCGGGGAAAAAGCCCCACCAAACACCCCAAAAGCCCCAATGCCCATTCTTCTTCTTCTTCTCCTTCTCCTTCTCCATCCATACACCCCATTTTATCCCTTGACATCTCAATGGCACGTCGGGAAACCACTCTTCCTTACTCTGTCCATCCCTTACCCTTGCCTCCTTGGGCTGGGCCTGGAGCTCCCATAGTCTCACCTCCTGCTATCTTTTCCCTTCCTGTTGCTAAGACGGAACCCTTGCCAATGAAAAATCAGTGGCAAAAAGGAAAACTTATTGGCAGAGGTACCTTTGGATCTGTTTATGTTGCCACCAATAGAAAAACTGGAGCATTGTGTGCAATGAAGGAAGCAGAAGCCTTTTCCGATGATCCAAAATCTGCAGAGTGCATAAGACAGTTAGAGCAGGAAATTAAAGTTCTTAGCCAACTGAAGCATCCAAACATTGTGCAGTATTTTGGTAGCGAAATAGTAGAAGACAAGTTTTATATATATTTGGAATATGTACATCCTGGTTCAATGAATAAATACGTTCGTGAACATTGTGGTGCAATAACCGAATGGGTTCTTCGGAGTTTCACACGCCATATTCTTTCGGGGTTGGCTTACTTACATAGCAAAAAGACAATTCATAGAGACATCAAAGGGGCTAACTTGCTTGTTGATTCTGCTGGTGTCGTTAAGCTTGCTGACTTTGGGATGGCCAAACATTACAGTTCTGCTCTATTTGGAAATTTCCTCGTTGGTTTCAACAGCACCTTTTCTCCTTTTGTGCTCCTTATAATGCTTTTGAGATTTCTGTGTCCACAGCTAACTGGACACGTTGCAGATCTTTCTTTGAAGGGAAGTCCATACTGGATGGCTCCAGAGCTTATGCAAGCAGTTGTACAAAAGGATAATAGCGTTGAAGTAGCTTTTGCTGTAGATATTTGGAGTTTGGGTTGTACAATTATTGAAATGTTTACGGGAAAGCCTCCTTGGAGCGAGTATGAAGGAGCCGCAGCTATGTTTAAGGTTATGACGGATACACCTCCTATACCAGAAACATTGTCAGCTGAAGATGTTTCGTGTTCCACGCATCTGTATAATGGAGCACCCTTAATGGATATCTACAGTCCCAGAGATTTGATCACATTTCCATTTCCTGTGAACATATTGCTGAGGGAAAATAGCCACTGCGAGGTGAGAATTTTTCATTATGATGTCCTTGCCATTATCCTCTGCTGGAAATGGAGATTGAATACGTTGCAGTGGCATCTCAGCGCTCTACTCGCTCTACTGTTGAAGTTCTTTCCAGGGATTGTCACCGACGCCCTCTCTAAGTCAGGTCCATCGATTTGTTCTGCCGCGTCCACTCCTTCGAAGTCGCAGCATTCCTACACTATCACTCTCCTTCCTAGCGACGGTATTGGCGCCGAAGTCATCTCTGTCGCCAAAGACGTTCTTCTCCTTGCCGGTTATCTCAAAGGGCAACTGTTCGTGATGAATTCAATTCGGGCACCACGATCTGGTTCAGGAGTAGCTACAAAGTCATCACCAGGAGTCATTAGAGTAGCTAGGCCACAGAAGAGCTCCCGTACGACTAGGAGAGCAAATTTCGTGTCCACTGTGTCAAGTATTGATGATTCCCCTGCATTGCATTCTGTATCAGATGTGTCTGGTAATGATCTTGGGATGTTTATGGGGCTGCGAGGAAGCTTTCCACGAGTATTGTACAACAATGCGTGGAAAAACTTGAACCGAGTTCGAATGGAGGTCGCGCGTAGAGATTGGAGAGTGCCCAACTTTACTCCTCATATTCCTATAGTGCATAGGGAGAAAGGCGAACCAGCCATGGAACCTCCTCCATCACAATCCATTCAAGTCTCTGGAGATGATACACAAGACAAGGTCATCAACGAATGTCCTCTAGTGTGCTGTCAACTTTACTATAACTTCTATGACTCAACTTGTCCAAACCTCACCGGAATTGTTCGATACAACGTGTTGTCAGCTATGGCCAAGGACGCAAGGATTGCTGCCTCTCTCCTACGCCTTCATTTTCATGATTGTTTCGTTCTTGGATGTGATGCATCGGTGCTGCTAGATGACACTGATACTCTAAAGGGGGAGAAAAATGCACTGCCTAATAAAAATTCACTGAGAGGATTTGAACTCATTGACAAAATCAAGGCCAACTTGGAAAAGGCTTGTCCTTCCACTGTGTCATGTGCTGATATACTGACTCTAGCAGCAAGAGAGGCTGTTTATCTTAGCAGAGGTCCATTTTGGTCTGTGCCTCTGGGTCGTAGAGATGGTACAACAGCAAGTGAGAGCGAGGCAAATAACTTGCCATCACCCTTTGAACCTTTAGAAAACATTACGGCCAAGTTTATATCAAAGGGTCTTGAAAAGAAGGATGTAGCAATACTCTCAGGTGCACACACTTTTGGCTTTGCTCAATGCTTCACGTTCAAGCCGAGGCTCTTCGACTTTGGTGGGTCTGGTAAATCTGATCCAGCACTAGATGAGTCACTTGTACAGAGTTTAAAAAAAGTGTGTCCAAACCAAGCTGATTCTGACACCAATCTGGCTCCCTTGGATCCTGTGACTACTAACACATTTGACAACAGTTACTACAAAAACATTGTGAACAAGTCGGGTTTACTTCAGTCAGACCAGGCTCTTTTGGGTGACACTGCAACTGCTTCATTGGTCAACAACTATAGCAAGTGGCCTATTCTGTTCTTCAGAGACTTTGCTGTTTCTATAGAGAAAATGGGTCGCATAGGTGCCCTTACAGGACAACAAGGCCAAATAAGGGCAAACTGTAGGGCTGTGAATTGA 3621 0.47 MRWLPTLIFSHSHSSSSPSTSPSSSSSSSATRKSSSPTSSTVSHARKHTRSAWFFGGTRKSTRSRKLSHVEDIDAVVITPLSRSTSTFDLSSAPSFGPQPLPLPRAIDSRLPSSKDVAAEKPNAAVDKPNAAVDFTLPAGFQMRSVFAREENRKNMEHVETKSPRVAPQQDTSSGASTSAQGDNFWLSAPARSAPTSPFASPRIIPNIAKTDDFVPYYYVSPKANQFWSAPEMPTSDPSAGHPPPAFFDLSALRTDTTLSPPHQSPRGKSPTKHPKSPNAHSSSSSPSPSPSIHPILSLDISMARRETTLPYSVHPLPLPPWAGPGAPIVSPPAIFSLPVAKTEPLPMKNQWQKGKLIGRGTFGSVYVATNRKTGALCAMKEAEAFSDDPKSAECIRQLEQEIKVLSQLKHPNIVQYFGSEIVEDKFYIYLEYVHPGSMNKYVREHCGAITEWVLRSFTRHILSGLAYLHSKKTIHRDIKGANLLVDSAGVVKLADFGMAKHYSSALFGNFLVGFNSTFSPFVLLIMLLRFLCPQLTGHVADLSLKGSPYWMAPELMQAVVQKDNSVEVAFAVDIWSLGCTIIEMFTGKPPWSEYEGAAAMFKVMTDTPPIPETLSAEDVSCSTHLYNGAPLMDIYSPRDLITFPFPVNILLRENSHCEVRIFHYDVLAIILCWKWRLNTLQWHLSALLALLLKFFPGIVTDALSKSGPSICSAASTPSKSQHSYTITLLPSDGIGAEVISVAKDVLLLAGYLKGQLFVMNSIRAPRSGSGVATKSSPGVIRVARPQKSSRTTRRANFVSTVSSIDDSPALHSVSDVSGNDLGMFMGLRGSFPRVLYNNAWKNLNRVRMEVARRDWRVPNFTPHIPIVHREKGEPAMEPPPSQSIQVSGDDTQDKVINECPLVCCQLYYNFYDSTCPNLTGIVRYNVLSAMAKDARIAASLLRLHFHDCFVLGCDASVLLDDTDTLKGEKNALPNKNSLRGFELIDKIKANLEKACPSTVSCADILTLAAREAVYLSRGPFWSVPLGRRDGTTASESEANNLPSPFEPLENITAKFISKGLEKKDVAILSGAHTFGFAQCFTFKPRLFDFGGSGKSDPALDESLVQSLKKVCPNQADSDTNLAPLDPVTTNTFDNSYYKNIVNKSGLLQSDQALLGDTATASLVNNYSKWPILFFRDFAVSIEKMGRIGALTGQQGQIRANCRAVN 1206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00611 1206 MobiDBLite consensus disorder prediction 8 47 - -
Vian10g00611 1206 Pfam Peroxidase 926 1168 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian10g00611 1206 Gene3D Phosphorylase Kinase; domain 1 345 440 - -
Vian10g00611 1206 SUPERFAMILY Heme-dependent peroxidases 906 1206 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vian10g00611 1206 Gene3D Peroxidase, domain 2 1043 1185 - -
Vian10g00611 1206 SUPERFAMILY Protein kinase-like (PK-like) 338 623 IPR011009 -
Vian10g00611 1206 FunFam Peroxidase 910 1056 - -
Vian10g00611 1206 ProSitePatterns Protein kinases ATP-binding region signature. 358 381 IPR017441 GO:0005524
Vian10g00611 1206 MobiDBLite consensus disorder prediction 1 47 - -
Vian10g00611 1206 MobiDBLite consensus disorder prediction 165 183 - -
Vian10g00611 1206 ProSiteProfiles Protein kinase domain profile. 352 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian10g00611 1206 SMART serkin_6 352 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian10g00611 1206 MobiDBLite consensus disorder prediction 86 111 - -
Vian10g00611 1206 PRINTS Haem peroxidase superfamily signature 1000 1017 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian10g00611 1206 PRINTS Haem peroxidase superfamily signature 938 952 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian10g00611 1206 PRINTS Haem peroxidase superfamily signature 1065 1080 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian10g00611 1206 PRINTS Haem peroxidase superfamily signature 1018 1030 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian10g00611 1206 PRINTS Haem peroxidase superfamily signature 1126 1141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian10g00611 1206 ProSitePatterns Peroxidases proximal heme-ligand signature. 1065 1075 IPR019793 -
Vian10g00611 1206 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 14 618 - -
Vian10g00611 1206 ProSitePatterns Peroxidases active site signature. 938 949 IPR019794 GO:0004601
Vian10g00611 1206 PRINTS Plant peroxidase signature 916 935 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian10g00611 1206 PRINTS Plant peroxidase signature 1140 1157 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian10g00611 1206 PRINTS Plant peroxidase signature 1180 1193 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian10g00611 1206 PRINTS Plant peroxidase signature 980 993 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian10g00611 1206 PRINTS Plant peroxidase signature 1064 1076 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian10g00611 1206 PRINTS Plant peroxidase signature 999 1009 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian10g00611 1206 PRINTS Plant peroxidase signature 940 960 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian10g00611 1206 PRINTS Plant peroxidase signature 1018 1033 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian10g00611 1206 PRINTS Plant peroxidase signature 1124 1139 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian10g00611 1206 Gene3D Transferase(Phosphotransferase) domain 1 441 643 - -
Vian10g00611 1206 ProSiteProfiles Plant heme peroxidase family profile. 906 1206 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian10g00611 1206 Gene3D - 910 1206 - -
Vian10g00611 1206 FunFam Peroxidase 1043 1185 - -
Vian10g00611 1206 Pfam Protein kinase domain 353 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian10g00611 1206 MobiDBLite consensus disorder prediction 230 249 - -
Vian10g00611 1206 MobiDBLite consensus disorder prediction 256 295 - -
Vian10g00611 1206 CDD secretory_peroxidase 906 1205 IPR033905 GO:0004601|GO:0042744
Vian10g00611 1206 MobiDBLite consensus disorder prediction 152 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00611 Vian-Chr10 5809595 5830999 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g00611 1 618 MAP Kinase Kinase Kinase AT5G66850 49.612 9.04e-170 517
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Vian10g00611 Pkinase 1.3e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00611 - - gmx:100793654 744.577