Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00552 ATGCTAGACCATCTACTCTCCTCGCAGCAGTCACAGCCTGAGTATTACACTGATCAAATCATCAAGGGTCTTATTATGGCGTTAATTGTGGCTGGAACAGAGACTTCTGCTGCAGCGTTGGAGTGGGCAATGTCCCGTTTGGCAAACCATCCAGAGGTGTTGGAAAAAGCAAGGATTGAATTGGAAAAGCACGTTGGAGAAGCGCGTTTGGTGGAGGAAACGGATATTCCCAAATTACATTACCTTCAGAATATAGTATCAGAAACTCTACGGTTGAATCCACCGGTCCCTATGTTAATACCTCATTTATCCTCGGAAGACTGCACCGTGGGAGGTTATGACGTGCCACGTAATACCGTGTTAATGGTGAATGCGTGGGCCATACACAGAGACCCGGAGTTGTGGGCTGACCCAACGAGTTTTAAGCCCGAGAGGTTTGACAATGGGCCAGTGAATGGTCACAAGCTGATCCCGTTTGGGATGGGAAGAAGGGCGTGTCCTGGCGCAGCCATGGCCCAAAGAACTTTGGGCTTAACTTTAAGCTCATTGATTCAATGCTTTGAATGGAAGAGAATTGGCGAAGAAGAAGTTGAGCTGAGTGAAGGAGAAGGAAATATAGTGCGGAAGGCCATTCCTTTGGAGCTGCAATGCAAGCCTCGTCAAATCCTCACAAACAATTTCTTATTTTCACTTAAATCCCTTTAA 705 0.4667 MLDHLLSSQQSQPEYYTDQIIKGLIMALIVAGTETSAAALEWAMSRLANHPEVLEKARIELEKHVGEARLVEETDIPKLHYLQNIVSETLRLNPPVPMLIPHLSSEDCTVGGYDVPRNTVLMVNAWAIHRDPELWADPTSFKPERFDNGPVNGHKLIPFGMGRRACPGAAMAQRTLGLTLSSLIQCFEWKRIGEEEVELSEGEGNIVRKAIPLELQCKPRQILTNNFLFSLKSL 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00552 234 PANTHER CYTOCHROME P450 82C3-RELATED 1 220 - -
Vian10g00552 234 Gene3D Cytochrome P450 1 227 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g00552 234 PRINTS P450 superfamily signature 166 177 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g00552 234 PRINTS P450 superfamily signature 31 48 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g00552 234 PRINTS P450 superfamily signature 84 95 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g00552 234 PRINTS P450 superfamily signature 157 166 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g00552 234 SUPERFAMILY Cytochrome P450 1 220 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g00552 234 PRINTS E-class P450 group I signature 20 37 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g00552 234 PRINTS E-class P450 group I signature 156 166 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g00552 234 PRINTS E-class P450 group I signature 83 101 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g00552 234 PRINTS E-class P450 group I signature 124 148 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g00552 234 PRINTS E-class P450 group I signature 166 189 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g00552 234 PRINTS E-class P450 group I signature 40 66 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g00552 234 Pfam Cytochrome P450 2 215 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g00552 234 Coils Coil 54 74 - -
Vian10g00552 234 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 159 168 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00552 Vian-Chr10 5218936 5219725 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g00552 1 223 Cytochrome P450 AT5G36220 60.538 7.37e-102 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00552 K13260 - gmx:100804509 366.311