Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00503 ATGGCGCGTTCCTTATGCCCATCCATTCCGAACACTTCCACCTTCTCTGATTTCTGCAAACTATACTCCTCCTCTCACCATTTATGTTTCCACTCCCCAAAATCAAACCTGCAATTTAAGCCTCGTCGGGGCCCAGAAGCGCGGCCCCTGGGTAACCGAAAGAGAAGAAGTTCAAAGAAGCTTACTGCGTCGAGCGAAGGAGCGAATGGTTATGGGAGTATAGAAGCAGATGGGTATAATGGGTCGGTGGAAGATAAGCAATTCGTGCGTTCCTTTCGCGAGGCCTGGCCTTACTTGTGGGCCTATCGTGGCAGCACCTTCGTTGTCATTATTTCTGGAGAAATTGTTTCTAGTCCTTTCCTAGATCCTATTCTCAAGGACATAGCTTTCCTTCATCAGCTAGGTATCCGGTTTGTTCTTGTTCCGGGGACACATGTGCAGATAGACAAGCTTTTGAATGAGAGAGGGTGCCAGCCTAAGTATGTTGGTAGATATAGGATAACTGATGAAGCATCTCTAGAAGCTGCGATGGAAGCCGCTGGGGGAATAAGATTGATGATCGAAGCAAAACTTTCTCCTGGACCTTCCATATGCAATATTCGTCGACATGGCGATAATAGTCGATGGCATGAAGTGGGTGTCAGTGTTGCCAGTGGTAACTTTCTTGCAGCCAAGAGAAGAGGGGTGGTCAATGGAATTGATTTTGGGTCAACTGGGGAAGTTAAAAAAGTAGACGTATCTCGCATGCGTGAGAGACTCGATGGTGGTTGTGTAGTTATTTTAACCAACTTGGGCTACTCCAGCTCTGGAGAAGTATTAAATTGCAACACCTATGAAGTAGCAACAGCTTGTGCCTTGGCTATAGGAGCAGACAAGTTGATATGCCTTATAGATGGTCCAATACTTGATGAGAATGGACGTTTAATTCGTTTCTTGCCTCTTCAAGAAGCAGACATGCTAATTCGTAAACGGGCTGAGCAAAGTGAAGTAGCTGCTAACTATGTCAAAGTTGTTGATGAAGAAGGTTTCAACTCTCCTGAATATAACAATTTTAATGGAATAGTCAAACCACCACCTATTGGGCGTTTCACAGAATGGCATAAAACAACCTTCCACAATGGTGTTGGTTTTGAAAATGGAAATGGCTTAGAGTCCAGTGAGCAAGGTTTTGCCATTGGAGGTCAAGAGCGGTTAAGTCGAATGCATGGTTACCTGTCAGAGTTGGCTGCTGCTGCTTTTGTTTGCAGAGGTGGTGTTCAAAGAGTTCACTTGCTGGATGGAACTATTAGTGGAGTTTTGTTGTTGGAATTGTTTAAAAGAGACGGGATGGGAACAATGGTGGCTAGTGACCTTTATGAAGGCACTCGGACAGCAGAGGTGAAAGATATTTCTGGAATAAAACAACTTATTCAGCCTTTGGAGGCATCTGGCATATTGGTTAAGCGGACTGATGATGAGCTCTTGCAAACATTGGATTCATTCGTTGTTGTGGAAAGAGAAGGTCACATAATTGCTTGTGCTGCCCTTTTTCCTCACTTTGAGGAGAAGTGCGGGGAAGTTGCTTGCATTGCAGTATCTCCTGATTGTCGTGGTCAAGGACAGGGTGACAAAATGCTTGATTATATGGAGAAGAAAGCATCGTATCTGGGACTGAATATGCTTTTCCTGCTAACTACACGTACAGCAGATTGGTTTGTGAGGCGTGGATTTTCAGAATGTTCTATTGATTATATTCCTGAAAAGAAAAGGAGAAAGATCAATCTTTCTCGCAATTCTAAGTATTATATGAAGAAGCTTCTGCCAAATAAAAGTGGAATTACTGTTGGTGTAAAATCTGATTCAAGTTAG 1848 0.4361 MARSLCPSIPNTSTFSDFCKLYSSSHHLCFHSPKSNLQFKPRRGPEARPLGNRKRRSSKKLTASSEGANGYGSIEADGYNGSVEDKQFVRSFREAWPYLWAYRGSTFVVIISGEIVSSPFLDPILKDIAFLHQLGIRFVLVPGTHVQIDKLLNERGCQPKYVGRYRITDEASLEAAMEAAGGIRLMIEAKLSPGPSICNIRRHGDNSRWHEVGVSVASGNFLAAKRRGVVNGIDFGSTGEVKKVDVSRMRERLDGGCVVILTNLGYSSSGEVLNCNTYEVATACALAIGADKLICLIDGPILDENGRLIRFLPLQEADMLIRKRAEQSEVAANYVKVVDEEGFNSPEYNNFNGIVKPPPIGRFTEWHKTTFHNGVGFENGNGLESSEQGFAIGGQERLSRMHGYLSELAAAAFVCRGGVQRVHLLDGTISGVLLLELFKRDGMGTMVASDLYEGTRTAEVKDISGIKQLIQPLEASGILVKRTDDELLQTLDSFVVVEREGHIIACAALFPHFEEKCGEVACIAVSPDCRGQGQGDKMLDYMEKKASYLGLNMLFLLTTRTADWFVRRGFSECSIDYIPEKKRRKINLSRNSKYYMKKLLPNKSGITVGVKSDSS 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00503 615 SUPERFAMILY Carbamate kinase-like 86 322 IPR036393 -
Vian10g00503 615 Hamap Amino-acid acetyltransferase [argA]. 87 599 IPR010167 GO:0004042|GO:0005737|GO:0006526
Vian10g00503 615 CDD AAK_NAGS-ABP 87 447 IPR033719 -
Vian10g00503 615 Pfam Acetyltransferase (GNAT) family 490 558 IPR000182 GO:0016747
Vian10g00503 615 NCBIfam amino-acid N-acetyltransferase 408 599 IPR010167 GO:0004042|GO:0005737|GO:0006526
Vian10g00503 615 CDD NAT_SF 494 556 - -
Vian10g00503 615 MobiDBLite consensus disorder prediction 37 69 - -
Vian10g00503 615 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 456 603 IPR016181 -
Vian10g00503 615 Pfam Amino acid kinase family 107 322 IPR001048 -
Vian10g00503 615 PANTHER AMINO-ACID ACETYLTRANSFERASE 50 607 IPR010167 GO:0004042|GO:0005737|GO:0006526
Vian10g00503 615 Gene3D - 86 452 IPR036393 -
Vian10g00503 615 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 453 601 IPR000182 GO:0016747
Vian10g00503 615 Gene3D - 453 599 - -
Vian10g00503 615 SUPERFAMILY Carbamate kinase-like 401 449 IPR036393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00503 Vian-Chr10 4722697 4730353 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vian10g00503 AA_kinase 1.3e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00503 K14682 - gmx:100777694 973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00503 10 4722697 4730353 Vian1g01566 1 17664607 17671413 PCT