Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00492 ATGCTTTCTCATCTTACTTCTTCCGATTCTCTGCTGGGAAATGCATTCCCGGCCTTCGACTATGCTCTCGCGCCCTGGGATGGGCTTGATTTTTTGGCCTTCAACCCCACTAGCCCCAACCCCGTCACCTCCAGTTCCGCTTCGGACGACCCCAAAACAACCCCTGCCGACCAAAAACCGCCCTCGGACCAGTCCAACCGGGTTGTGTCCTTCACGGAGGAGCGAAAACGCAGGAGAATGATATCGAACCGGGATTCGGCCCGAAGGTCACGCATGCGTAAACAGAGACACCTAGAGAACTTACGGAACCAGATGAACCTGTTTCGCGTTGAAAACCGGGAACTGAACAACGGGTTTCAGTTCCTCCTTCACCACTGTAACCGTCTACGAACGGAAAACGAGTGGCTCCGGTCCGAACGAACCATGCTCCGCCAAAAACTGGCCGACATAAACCAAATTTTGCTCTTCCGACAATTGCAACCATTTTCCACTGCATGGCCGTGCAATATTGTCATGACAGAATAA 525 0.5257 MLSHLTSSDSLLGNAFPAFDYALAPWDGLDFLAFNPTSPNPVTSSSASDDPKTTPADQKPPSDQSNRVVSFTEERKRRRMISNRDSARRSRMRKQRHLENLRNQMNLFRVENRELNNGFQFLLHHCNRLRTENEWLRSERTMLRQKLADINQILLFRQLQPFSTAWPCNIVMTE 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00492 174 MobiDBLite consensus disorder prediction 40 95 - -
Vian10g00492 174 Coils Coil 84 118 - -
Vian10g00492 174 SMART brlzneu 71 135 IPR004827 GO:0003700|GO:0006355
Vian10g00492 174 MobiDBLite consensus disorder prediction 69 88 - -
Vian10g00492 174 MobiDBLite consensus disorder prediction 40 68 - -
Vian10g00492 174 FunFam BZIP transcription factor 73 124 - -
Vian10g00492 174 Gene3D - 73 149 - -
Vian10g00492 174 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 73 136 IPR004827 GO:0003700|GO:0006355
Vian10g00492 174 CDD bZIP_plant_GBF1 76 127 IPR045314 GO:0003700|GO:0006355
Vian10g00492 174 SUPERFAMILY Leucine zipper domain 75 127 IPR046347 GO:0003700|GO:0006355
Vian10g00492 174 PANTHER BZIP TRANSCRIPTION FACTOR 44 38 157 - -
Vian10g00492 174 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 78 93 IPR004827 GO:0003700|GO:0006355
Vian10g00492 174 Pfam bZIP transcription factor 74 134 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00492 Vian-Chr10 4615354 4615878 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g00492 10 158 bZIP Transcription Factor Family AT3G49760 35.570 3.65e-29 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vian10g00492 bZIP_1 2.3e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00492 - - gmx:102661188 258.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00492 10 4615354 4615878 Vian1g01554 1 17492343 17492858 PCT