Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00457 ATGCAACACCCTCTTCCACCTGGTCATCTGGGTTGGCCTTTCTTGGGAAACATGCTCACCTTCTTCAAAGCTTTCAAATCTGATCCTGATTCTTTTATCTATGATCTTGTTTTCAGATATGGCAGGACTGGTATGTACAGAACATTCTTATTTGGAAGCCCTAGCATCATCGTATGCACCCCAGAGACATGTCGTAGGGTTCTCACAGATGATGAACAACTGAAGCTTGGATACCCTGCTTCCACCACCTCCCTCTTTGGAAAGAGATCGTTCCATGGCATCTCAAATGAGGAACACAAGCGTCTTCGTCGCTTAACCACCTCTCCCATAACTGGCCACGAGGCATTGTCCATGTACGTAGGTCTCATAGAAGATGCTTCTGTCAAACTGCTGGAAGAGTTGTCTAGCATGAGCACTCCTTCTGAGTTCCTCACAGAGTTGAGAAAGTTCGCTTTTAAGATCATCACCACCATTTTCATGGGCTCTGATGTTCACCATGTGGATCTTGGCTTGGTCGAAAACTTGTACAGAGATTTCAGTCGCGGAATTAAGTCACTGCCTATCAATCTCCCAGGCTTTGCATTCTATAAAGCAGTCAAGGCACGAAAGAAGTTGACGAAGTTGCTGCAAGGTGTGGTGGAGCTAAAGAGAAGGAGCAACAGTAGAAAAAGAAAGACGAAAAGGGATATGATGGATTCATTGATGGAAGTGAAAGATGAAGAGGGTAAGCAGCTGGAGGATGAAGACATTATAGACTTACTTCTGGTGTTCTTGTTAGCTGGCCACGAAAGGGTTTTACTCACAGAACTTTGCACCTTCCAGAAAGAACAAGAAGAGATCATGCAAGCAAGACCCTCCACTCAGAAAGGACTGAACATAAAGGAAATTAAGCAAATGGAATATCTTTCAAAGGTTATTCATGAGATGCTGCGCAAAACATCTATCTCGTTTGCGAACTTTAGACAGGCAAAGGTTGACCTCAGCATCAATGGTTTTACTATACCAAAAGGATGGAAAGTTCTGGTTTGGAACCGAGGGGTGCATATGGACCCTGAAACTTACAACAATCCAAAGGAATTCGATCCTTCCAGATGGGAAAATCACACAGCAAGAGCAGGTTCTTTTATTCCATTTGGATTAGGAAGCAGATTTTGTCCTGGGAGCGACCTGGCCAAACTTGAGATCACCATTTTCCTCCATCATTTTCTTCTTAACTACAGGATGGAGAGAGTTAACCCAGATTGTCGAATCACTTATCTACCATTGCAAAGGCCCTTAGATAACTGCTCTGCAAGAATTATAAAACTCACATAA 1314 0.4338 MQHPLPPGHLGWPFLGNMLTFFKAFKSDPDSFIYDLVFRYGRTGMYRTFLFGSPSIIVCTPETCRRVLTDDEQLKLGYPASTTSLFGKRSFHGISNEEHKRLRRLTTSPITGHEALSMYVGLIEDASVKLLEELSSMSTPSEFLTELRKFAFKIITTIFMGSDVHHVDLGLVENLYRDFSRGIKSLPINLPGFAFYKAVKARKKLTKLLQGVVELKRRSNSRKRKTKRDMMDSLMEVKDEEGKQLEDEDIIDLLLVFLLAGHERVLLTELCTFQKEQEEIMQARPSTQKGLNIKEIKQMEYLSKVIHEMLRKTSISFANFRQAKVDLSINGFTIPKGWKVLVWNRGVHMDPETYNNPKEFDPSRWENHTARAGSFIPFGLGSRFCPGSDLAKLEITIFLHHFLLNYRMERVNPDCRITYLPLQRPLDNCSARIIKLT 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00457 437 PRINTS B-class P450 signature 376 385 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g00457 437 PRINTS B-class P450 signature 304 315 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g00457 437 PRINTS B-class P450 signature 385 396 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g00457 437 PRINTS B-class P450 signature 321 348 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g00457 437 PRINTS B-class P450 signature 349 364 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g00457 437 PRINTS B-class P450 signature 94 105 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g00457 437 PANTHER CYTOCHROME P450 26 5 421 - -
Vian10g00457 437 SUPERFAMILY Cytochrome P450 4 433 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g00457 437 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 378 387 IPR017972 GO:0005506|GO:0016705
Vian10g00457 437 Gene3D Cytochrome P450 1 436 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g00457 437 Pfam Cytochrome P450 6 410 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00457 Vian-Chr10 4219364 4221634 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g00457 2 435 Cytochrome P450 AT2G32440 52.772 4.26e-168 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00457 K04123 - gmx:100775911 580.482