Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00451 ATGGGTATTTTGTTAAATGCTACAACTCTAAGTGGAGTGAAACTTCTTGTTCATGACTACTACGAGGAGAAGTGTCCCTTAGCCGAAGACATCGTGAGACATAACGTGGAGGTGGCACTTTTGAACAATCCTCGTTTGGCAGCCTCTCTACTACGCTTACACTTCCACGATTGTTTTGTCATGGGTTGTGATGCATCGGTGCTTCTGGACAGCGTGGAGGGCATGACAAGTGAAAAACTGGCTGGGCCAAATGTGAACTCTTTACATGGGTTTGAGTTGATAGACAAGATAAAGTATTTGCTGGAAGAGGAATGTCCTATTACTGTTTCATGTGCAGACATCCTTGCCATGGCTGCACGTGATGCAGTTCAATTGAGAGGAGGACCAAGATGGGAGGTGTTGCTAGGGAGGAAGGATTCTCTGGAGTCGAGTTTCAGTGGAGCTAACCTTTTCATTCCTGCTCCAAATTCCTCTCTAGAGGTTCTCATAGATAACTTCAAGCAACAAGGCCTTGACATAGAAGACTTGGTAACTCTATCAGGTAGCCATACTATAGGAAGAGCAAGATGCCTAAACTTCAGGCAGAGGATATATGAATCAGAAGATGAATATCACCATGGCAATGATCGCTACAAGCGGTACACAACCTTCAGGAGAATTCTGCGGTCCATTTGCCCTGTTGAGGGAAGGGACAACAAATTTGCACCCCTTGATTTGCAGACCCCAGAAAGGTTTGACAATCAGTATTTTATAAACATTCTTGGAGGGAATGGCTTGTTGGGTTCTGATAATGTTCTTATCAGCCAGGATTTGGATGGAAAGATTACAAAGCATGTGTGGGCTTATGCCTCCAACGAAAAACTTTTCTTTGCTTCATTTGCTAAATCTATGATTAAGATGGGAAATATCAATGTTCTTACAGGTGATGAAGGAGAAATTAGGAGGAATTGTAGATTTGTCAATGCCTACTAG 972 0.43 MGILLNATTLSGVKLLVHDYYEEKCPLAEDIVRHNVEVALLNNPRLAASLLRLHFHDCFVMGCDASVLLDSVEGMTSEKLAGPNVNSLHGFELIDKIKYLLEEECPITVSCADILAMAARDAVQLRGGPRWEVLLGRKDSLESSFSGANLFIPAPNSSLEVLIDNFKQQGLDIEDLVTLSGSHTIGRARCLNFRQRIYESEDEYHHGNDRYKRYTTFRRILRSICPVEGRDNKFAPLDLQTPERFDNQYFINILGGNGLLGSDNVLISQDLDGKITKHVWAYASNEKLFFASFAKSMIKMGNINVLTGDEGEIRRNCRFVNAY 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00451 323 PANTHER PEROXIDASE 72-RELATED 16 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian10g00451 323 SUPERFAMILY Heme-dependent peroxidases 17 321 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vian10g00451 323 CDD secretory_peroxidase 16 320 IPR033905 GO:0004601|GO:0042744
Vian10g00451 323 ProSiteProfiles Plant heme peroxidase family profile. 15 321 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian10g00451 323 Pfam Peroxidase 33 284 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian10g00451 323 PRINTS Plant peroxidase signature 236 251 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian10g00451 323 PRINTS Plant peroxidase signature 49 69 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian10g00451 323 PRINTS Plant peroxidase signature 89 102 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian10g00451 323 PRINTS Plant peroxidase signature 108 118 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian10g00451 323 PRINTS Plant peroxidase signature 127 142 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian10g00451 323 PRINTS Plant peroxidase signature 25 44 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian10g00451 323 PRINTS Plant peroxidase signature 295 308 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian10g00451 323 PRINTS Plant peroxidase signature 252 269 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian10g00451 323 PRINTS Plant peroxidase signature 174 186 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian10g00451 323 PRINTS Haem peroxidase superfamily signature 127 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian10g00451 323 PRINTS Haem peroxidase superfamily signature 47 61 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian10g00451 323 PRINTS Haem peroxidase superfamily signature 175 190 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian10g00451 323 PRINTS Haem peroxidase superfamily signature 238 253 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian10g00451 323 PRINTS Haem peroxidase superfamily signature 109 126 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian10g00451 323 FunFam Peroxidase 19 167 - -
Vian10g00451 323 ProSitePatterns Peroxidases proximal heme-ligand signature. 175 185 IPR019793 -
Vian10g00451 323 Gene3D Peroxidase, domain 2 153 300 - -
Vian10g00451 323 ProSitePatterns Peroxidases active site signature. 47 58 IPR019794 GO:0004601
Vian10g00451 323 FunFam Peroxidase 153 300 - -
Vian10g00451 323 Gene3D - 20 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00451 Vian-Chr10 4159922 4161188 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g00451 75 321 Peroxidase AT2G35380 65.992 6.34e-120 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00451 K00430 - gmx:100778051 582.793