Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00409 ATGTGCCGGCAGAATTCTCTGGCGCACCATTCTGGTGAAGAAGAAATTGCGGCTGACGAGAGCCTTTTGGTTTATTGCAAGCCTGTTGAACTGTACAATATTCTCTACCGCCGTGGTCTTCAAAATCCTTCCTTTCTTAGCAGATGTTTGCGCTATAAAATTACAGCAAGGCAGAAAAGGAGGTTGAGAGCAGGAATAGTGATTTTCAATTATAGGGATCACTACAACATGCTTCGAAAGACAGAAGTGACTGAAGACTTTTCTTGCCCGTTTTGCTTGATGCAGTGTGGAGGCTTTAAGGGTTTGCGACTTCATCTATGTTCATCACATGATCTATTCAACTTTGAGTTCTGGGTTACTGAAGATTACCAAGCAGTGAACGTGTCAGTAAAAGTGGATATATCGAGATCAGAGAATGTTGCTGATGGAATAATTCCACAATTGCAAACCTTCTTCTTCTGTTCAAGGCCTCGAAAGCGTAGAAGAAAGGACTCTGTTCAAAATGAAAAGCGCAGCAATGTAAAATTCATGGAGTTGGATTCACCTGAAGACATACAGAACGGATTTATACTAAAGGATGATGATATCCTACGCTGCAAAGGGGAGAATGTGTCTAGAACATCTCGTAATGAGAAGATACTGCTTAGTGGAAGAAATGATGGAGGGAAATTTGGTCCTGATCATCCTGGCACCATGGACGACCTTGAGCATGTTGAATCCAGTTTCAACATTTCTGGTGTTTCGATTGCCATGCCTCAATCTTCTGGAGACCCTGAATGTAGTAAATCAATATGTAAAAGTGATCCTGCTCTGCCTGCTAAATCAAAGAAACTAAGCATGGATCGATCAGACTCGAGAAACCGAATGCTTCTGCAGAAGAGAGTGTTCTTTCACTCACACAGAGTCCAGCCTATGGCACCAGAACAAGTGTTGTCAGACCGTGATAGTGAAGATGAAGTTGACGATGACATTGCAGATCTTGAAGATAGAAGGATGCTTGATGATTTTGTGGATGTTTCCAAAGATGAAAAACAACTCATGCATCTCTGGAACTCCTTTATGAGGAAGCAAAGGGTGCTGGCGGATGGTCATGTGCCGTGGGCCTGTGAGGCATTTTCCAAGCTTCATGGAAAAAAGCTGGTCACATCTCCAACTTTATTCTGGTGTTGGAGGTTGTTCATGATTAAACTTTGGAATCATGGTCTTCTTGATGCCTGCACAATGAACAACTGTAACAGAACATTAGATAGTTACAGAAACGAGGGATTGGGTACTAGCAAATAA 1284 0.4221 MCRQNSLAHHSGEEEIAADESLLVYCKPVELYNILYRRGLQNPSFLSRCLRYKITARQKRRLRAGIVIFNYRDHYNMLRKTEVTEDFSCPFCLMQCGGFKGLRLHLCSSHDLFNFEFWVTEDYQAVNVSVKVDISRSENVADGIIPQLQTFFFCSRPRKRRRKDSVQNEKRSNVKFMELDSPEDIQNGFILKDDDILRCKGENVSRTSRNEKILLSGRNDGGKFGPDHPGTMDDLEHVESSFNISGVSIAMPQSSGDPECSKSICKSDPALPAKSKKLSMDRSDSRNRMLLQKRVFFHSHRVQPMAPEQVLSDRDSEDEVDDDIADLEDRRMLDDFVDVSKDEKQLMHLWNSFMRKQRVLADGHVPWACEAFSKLHGKKLVTSPTLFWCWRLFMIKLWNHGLLDACTMNNCNRTLDSYRNEGLGTSK 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00409 427 CDD VEFS-box_EMF2-like 291 418 - -
Vian10g00409 427 CDD ZnB-Zn_EMF2-like 13 134 - -
Vian10g00409 427 PANTHER POLYCOMB GROUP PROTEIN 9 61 - -
Vian10g00409 427 Pfam VEFS-Box of polycomb protein 278 413 IPR019135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00409 Vian-Chr10 3687687 3696230 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g00409 1 68 C2H2 Transcription Factor Family AT5G51230 57.353 1.81e-12 67.4