Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00402 ATGGGTGGATTCATCATTTTCTTCCTTTTCTGTGTTCTCATCTTGCAAAGCTCTGTTCTTGAGGTGACCCATGCAAGGTTCCAATCAACAAAGTGTGGAGATGCAGGTCCTGACATCCACTACCCATATCAGATAAAAGATCAGCACCAGCAGTATGAGTCCCTTCCTGGTTTTGAGCTTCTTTGCAAAGATAACCTCACCACCATCCACTTTCCATCTTATGGAGATTTAGAAGTGAAGTCTATCTCCTATGACACCAAAAACATTCACCTCCTTGACCCCAAAAAATGTGTCCATCATGTCTTTCTGAACCTCAATCTCTCCCTCACTCCCTTCCACTACTTTTATGTTCTGAAAAACTATACATACCTCAATTGCTCAACCACCCTTCTACCTCCTTTCGTGGAGATTCCATGTTTAAGTGCTGCTAGTTATCATGTCTACACAGTTGACCCTGCACTACCAGTGCCAGCTTCATGTGCGGGAGTTAAAACCGTTGCCATTCCTTTTGCATATAGCCCTTATCTCTCTGACAGTAAACTCGGTCTTAGATTAACATGGAGCATGCGTGAACCTGAAGACAGGGAAACAACAAACGGTGCTAGAGGTTCCCATACATGGCGTAACATAGGTATTGGGTTCGGCATGTTTGTTTTTGTGATGGCAATGTTATTGCTTATAAGAACAAAGATTAGTGTTGCCGCGAGGAATAACCATCTGAAAGAAGAGCAGTTATTGCATAGTTAG 747 0.4284 MGGFIIFFLFCVLILQSSVLEVTHARFQSTKCGDAGPDIHYPYQIKDQHQQYESLPGFELLCKDNLTTIHFPSYGDLEVKSISYDTKNIHLLDPKKCVHHVFLNLNLSLTPFHYFYVLKNYTYLNCSTTLLPPFVEIPCLSAASYHVYTVDPALPVPASCAGVKTVAIPFAYSPYLSDSKLGLRLTWSMREPEDRETTNGARGSHTWRNIGIGFGMFVFVMAMLLLIRTKISVAARNNHLKEEQLLHS 248
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00402 248 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 4 199 IPR046948 -
Vian10g00402 248 Pfam Wall-associated receptor kinase galacturonan-binding 31 93 IPR025287 GO:0030247
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g00402 29 202 C3H Transcription Factor Family AT2G25410 28.261 4.54e-14 68.9
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00402 - - gmx:100790327 363.614