Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00356 ATGGCGAGTGGGTGGATGAAGTCATTGCAGTGCAAGTCAAGAGCTTACGAAGACGTCTACCACCCAAATTCTAAATACCTCATTCCCAGTTCGAGTTGCAGAAAGAGCGTTCAAAACATCAAAGACGTCGTCGTTGACACCACCAAGCCCAAGTCCAAGCCCAAACCCAGGCCCGAAAAGCCTCTTCAGAAACACCCCAGCTCCAGATACCCTCCATCCGCAGCCAAGCCCGATTTTGAAACCACTATCAACCGCTCCCGGAGCGTCACAGCCACCGCCACGCGCCACGCCGACCCTCGCTTCCCTTCTCTCACCGAACTCACCGAGGGGCATCCTTCGCGGAACGTGGTGGAGATAATCTTTCACACCAGCTGGGGGCCCAAGCCTTTCTCGGGCCGTGTCGAGATGATATTTAAGGTCCACAACGGCCCGAGAACGGTCTCCCGCTTCGAGGAGTATCGGGAGACGGTGAAGGGCCGGGCGGGAACAGGGACTGGACCTGCCCATGACTACGAGGAGAATGCGAGATGCGTTGCGGACGGGAATGAGGTCATGAGGTTTCACTGCTTGGGCCCCACCTCCAGCGGCGCCCCCTACGGCGGAGCCTGCGCGTTGTCCTTCCCCGGCGGTAAGGGCTCGGCTATTTGCACATTCGCCGGCAGCGGCGACGCCCATGAAAGCTCTGGCGGAGGTAGGGGCAGGAGGGCAATGCTTGTGTGTCGGGTCGTAGCGGGTCGGGTCTCCAAGCAAAATGGGTTCATGGAATCGTTGTTGGATGGACGAGTTGGGTTCGACTCAGTCAGTGGGGACAACGGCGAGTTATTAGTGTTTGACTCGCGCGCTGTGTTGCCCTGTTTTCTCATCATTTATAAATTGTAA 879 0.5757 MASGWMKSLQCKSRAYEDVYHPNSKYLIPSSSCRKSVQNIKDVVVDTTKPKSKPKPRPEKPLQKHPSSRYPPSAAKPDFETTINRSRSVTATATRHADPRFPSLTELTEGHPSRNVVEIIFHTSWGPKPFSGRVEMIFKVHNGPRTVSRFEEYRETVKGRAGTGTGPAHDYEENARCVADGNEVMRFHCLGPTSSGAPYGGACALSFPGGKGSAICTFAGSGDAHESSGGGRGRRAMLVCRVVAGRVSKQNGFMESLLDGRVGFDSVSGDNGELLVFDSRAVLPCFLIIYKL 292
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00356 292 MobiDBLite consensus disorder prediction 46 64 - -
Vian10g00356 292 Gene3D - 102 291 - -
Vian10g00356 292 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 5 290 - -
Vian10g00356 292 MobiDBLite consensus disorder prediction 33 95 - -
Vian10g00356 292 SUPERFAMILY ADP-ribosylation 103 291 - -
Vian10g00356 292 MobiDBLite consensus disorder prediction 79 93 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vian10g00356 Vian-Chr10 3203240 3204118 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g00356 40 292 C2H2 Transcription Factor Family AT2G29660 31.153 7.44e-32 119
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00356 - - gmx:100804686 521.931
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00356 10 3203240 3204118 Vian10g00356 10 3203240 3204118 ECH