Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00355 ATGTCGGCTTACAAAGACCAGGATCCTCGTCTTCATGGCATCAAAACTAAGATTCGTGTCGTCCCAAATTTCCCCAAATCCGGTATTATGTTCCAAGACATTACTACTCTATTGCTTGATCCGAAAGCATTTAAGGACACAATCGATTTGTTCGTCGAGCGATACAAGGGCAAAAACATTTCTGTTGTTGCAGGAATTGAAGCTCGAGGTTTTATTTTTGGTCCTCCCATTGCACTGGCTATAGGAGCAAAGTTCGTTCCTTTGAGGAAACCAAAGAAGTTGCCTGGAAAAGTTATATCCCAAGAATATATTCTGGAATATGGAAGGGACTGTCTTGAGATGCATGTTGGAGCTGTTGAATCTGGTGAACGTGCTTTAGTGGTTGATGATTTGATTGCAACGGGAGGAACACTCTGTGCAGCTATGGATTTGCTAGAACGTGTGGGAGCAGAAGTAGTGGAGTGTGCATGCGTAATTGAATTACCGGAAATGAAGGGTCGTGAGCGTTTGAACGGGAAGCCATTGTACGTGTTGGTGGAATATAAGGAGAAATGA 555 0.4324 MSAYKDQDPRLHGIKTKIRVVPNFPKSGIMFQDITTLLLDPKAFKDTIDLFVERYKGKNISVVAGIEARGFIFGPPIALAIGAKFVPLRKPKKLPGKVISQEYILEYGRDCLEMHVGAVESGERALVVDDLIATGGTLCAAMDLLERVGAEVVECACVIELPEMKGRERLNGKPLYVLVEYKEK 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00355 184 FunFam Adenine phosphoribosyltransferase 1 2 181 - -
Vian10g00355 184 Hamap Adenine phosphoribosyltransferase [apt]. 14 181 IPR005764 GO:0003999|GO:0005737|GO:0006168
Vian10g00355 184 Pfam Phosphoribosyl transferase domain 50 165 IPR000836 -
Vian10g00355 184 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 5 180 - -
Vian10g00355 184 SUPERFAMILY PRTase-like 12 176 IPR029057 -
Vian10g00355 184 NCBIfam adenine phosphoribosyltransferase 14 181 IPR005764 GO:0003999|GO:0005737|GO:0006168
Vian10g00355 184 Gene3D - 2 183 IPR029057 -
Vian10g00355 184 CDD PRTases_typeI 48 180 IPR000836 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00355 Vian-Chr10 3185822 3192080 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g00355 1 180 PRT Gene Family AT1G27450 74.444 1.29e-96 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00355 K00759 - gmx:100306411 357.066