Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00352 ATGGCTGAGTTCAACTCAGTTCCTCATTGGCTTCTCATTCTCAAGGAGGAGAAGTTTTTCAGTCGCTGTTTGAGTCATGGCTCTGTAAAGAAGAATGAGAAGAACATCTTTTGCTTAGATTGCTGCACGAGCATTTGCCTCCACTGTTTGCCCTTTCATCGCTCTCACGTCCTTCTGCAGATACGAAGATACATGTACAATGATGTATTACGGCTTGGTGATGCTGAAACAGTGTTGAACTGTTCCCTTGTTCAACCGTACACAACAAATAAAACCAAGGTTGTGTTTTTGAAACAGAGGCCTCACACTCGTTCTCACAAAGGCTCTAGCAACCTTTGCATCACGTGTGACCGTAACCTTCAAGACCCTTACATCTTCTGCTCTCTGTCTTGCAAGGTGCATCAACATCTTCTACTGATTACCAAAAGCACAACCATGGAAGGAACTTGGAACAAGTATGAATTCTCTGTGCTACTTGACAAAGAACGATGCAGGGAGAATGCACGACAGATTGAAGACAGCCAAATCACAACAGATTCAGAACTAGACTCACCCACAGTTTCTGGGTCAACGAGTAGTATCGGTGAGGGTGGTGTTGCAGAGACTGTGAATAATTCACTCAAAAAGAAACGTGGCAACGTTGAAATGGTGCCGGAGATCTGGTACACCGTGGTGAACCGGCGAAAAGGTGTTCCTCATCGATCTCCACTGTACTAA 717 0.4477 MAEFNSVPHWLLILKEEKFFSRCLSHGSVKKNEKNIFCLDCCTSICLHCLPFHRSHVLLQIRRYMYNDVLRLGDAETVLNCSLVQPYTTNKTKVVFLKQRPHTRSHKGSSNLCITCDRNLQDPYIFCSLSCKVHQHLLLITKSTTMEGTWNKYEFSVLLDKERCRENARQIEDSQITTDSELDSPTVSGSTSSIGEGGVAETVNNSLKKKRGNVEMVPEIWYTVVNRRKGVPHRSPLY 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00352 238 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 6 237 - -
Vian10g00352 238 MobiDBLite consensus disorder prediction 170 206 - -
Vian10g00352 238 MobiDBLite consensus disorder prediction 173 200 - -
Vian10g00352 238 ProSiteProfiles Zinc finger B-box type profile. 18 61 IPR000315 GO:0008270
Vian10g00352 238 Pfam PLATZ transcription factor 62 133 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00352 Vian-Chr10 3167311 3168387 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Vian10g00352 PLATZ 1.6e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00352 - - vun:114173273 422.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00352 10 3167311 3168387 Vian10g00352 10 3167311 3168387 ECH