Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00321 ATGTACAAAGTTTGCAATGATCAAGTAGGGTGCACTGAAAGTGCCATCTTAGCCGCAATGGACATAGCCATTGATGATGGTGTTGATGTTCTTTCTCTCTCCCTTGGATTAGGCTCTCTTCCGTTCTTTGAAGACCCTATTGCCATTGGTGCATTTGCGGCTATTCAGAACGGAGTTTTTGTTAGTTGCTCAGCCGCAAACGCTGGCCCTGACTATGCCACACTCTCCAACGAAGCCCCGTGGATCCTCACCGTTGGTGCAAGCACTATTGACAGAAAGATAGCAGCATCGGCAGTACTTGGAAATGGTGCAGAATATGCAGGGGAATCTTTGTTCCAACCCCAAGACTTTTCCCCTACACTGTTGCCACTTGTGTATCCTGGTGCAAATGGGAACCTCAGCTCCGGCTTCTGTTTACCTGACTCCTTAGACGACGTCGATGTGGAGGGAAAAGTGGTGGTCTGCGACATAGGTGGAGGATTTTCAAGTGTAGCCAAAGGACAAGTAGTTCTGGACGCTGGTGGCGCTGCCATGATTCTCGCCAACCCAGAACGTTTGGGCTTCAGTACTTTCGCTGTTGCTCATGTTTTGCCTGCAGTGGAAGTTAGTTACCTTGCTGGGTTGGCCATAAAGTCTTACATAAACTCAACTACCTCACCAAATGCAACAATCTCGTTCCAAGGAACCGTGATTGGTGATGCACTTGCTCCCGCAGTTGTTTCATTTTCTTCAAGGGGTCCAAGCCAGGCCAGTCCTGGGATTCTGAAACCCGACATTGTTGGACCAGGAGTGAACATTTTAGCTGCATGGGCTATCTCTGTAGACAACAAATTCCCACCATACAATATTGTTTCAGGAACATCAATGTCTTGTCCTCACCTTAGTGGTATTGCTGCATTGCTCAAAAGTGCACACCCTGATTGGTCTCCTGCGGCTATCAAATCAGCAATTATGACCACTGCCCACACACTCAACCTCGGAGGAAAACCCATATTGGACCAGAGGCTTCTTCCTGCTGACATATTTGCCACCGGTGCAGGCCATGTTAACCCTAACAAAGCGAATGATCCGGGGCTTGTTTATGATATTCAGCCAGATGATTACATTCCCTATTTGTGTGGCTTAGGTTATGATGATAGAGAAATAGGAATTCTTGTGCAAAAGAGAGTGAGATGCAGCGGTGTAACAGTCGTATCAGAAGCACAACTGAATTACCCTTCGTTTTCTATTGTGCTGGGGTCAACTACACAGGACTACACCAGAACATTGACGAACGTTGGACCTGCAGAGGCAACTTACGTGGTGGATCTTGAAGTTCCTCTGGCGACGGGGATGAGCGTGAACCCTAGTCAGATAACATTCACGCAGGTGAAGCAGAAGGTTACATTCTCTGTGGAGTTTATCCCACAGGAAAAGGAAAATAGGGGCAACAATAGTTTTGCTCAGGGTTCTCTTACCTGGATCAGGGTGTCTGACAAACACACCGTTAGAATCCCCATATCGGTTATTTTCGAGTGA 1518 0.4736 MYKVCNDQVGCTESAILAAMDIAIDDGVDVLSLSLGLGSLPFFEDPIAIGAFAAIQNGVFVSCSAANAGPDYATLSNEAPWILTVGASTIDRKIAASAVLGNGAEYAGESLFQPQDFSPTLLPLVYPGANGNLSSGFCLPDSLDDVDVEGKVVVCDIGGGFSSVAKGQVVLDAGGAAMILANPERLGFSTFAVAHVLPAVEVSYLAGLAIKSYINSTTSPNATISFQGTVIGDALAPAVVSFSSRGPSQASPGILKPDIVGPGVNILAAWAISVDNKFPPYNIVSGTSMSCPHLSGIAALLKSAHPDWSPAAIKSAIMTTAHTLNLGGKPILDQRLLPADIFATGAGHVNPNKANDPGLVYDIQPDDYIPYLCGLGYDDREIGILVQKRVRCSGVTVVSEAQLNYPSFSIVLGSTTQDYTRTLTNVGPAEATYVVDLEVPLATGMSVNPSQITFTQVKQKVTFSVEFIPQEKENRGNNSFAQGSLTWIRVSDKHTVRIPISVIFE 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00321 505 CDD PA_subtilisin_like 99 224 - -
Vian10g00321 505 FunFam subtilisin-like protease SBT1.5 91 231 - -
Vian10g00321 505 SUPERFAMILY Subtilisin-like 1 359 IPR036852 GO:0004252|GO:0006508
Vian10g00321 505 Gene3D Peptidase S8/S53 domain 1 368 IPR036852 GO:0004252|GO:0006508
Vian10g00321 505 Pfam Subtilase family 2 328 IPR000209 GO:0006508|GO:0008236
Vian10g00321 505 ProSiteProfiles Serine proteases, subtilase domain profile. 1 355 - -
Vian10g00321 505 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 502 IPR045051 -
Vian10g00321 505 Gene3D - 91 231 - -
Vian10g00321 505 Pfam PA domain 123 210 IPR003137 -
Vian10g00321 505 Gene3D - 372 503 - -
Vian10g00321 505 Pfam Fibronectin type-III domain 402 502 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00321 Vian-Chr10 2921105 2922622 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g00321 2 501 Subtilisin-like Serine Gene Family AT2G05920 47.451 2.33e-143 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00321 - - gmx:100783595 858.596