Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00320 ATGTACAAGGTATGTGATCTCTCTGGTTGTTTGGAAAGTGCAATACTGGCTGGAATGGACACTGCCATTGAGGATGGCGTGGATGTACTTTCTCTCTCCCTTGGAGGACCCTCTTTTCCTTTCTTTGACGATCCAATTGCACTTGGTGCATTCAGCGCAATTCAGAAGGGAATTTTCGTTAGTTGTTCGGCTGGTAACTCCGGTCCTGATTATGCCAGTTTATCTAATGAGGCTCCGTGGATTCTCACCGTTGGCGCAAGCACCATTGACAGAAGAATATTAGCAACAGCGAAACTTGGCAACGGGCAACTGTTCATCGGGGAATCTATTTTCCAACCCCACGACTTCACGCCCACGTTACTACCACTTGTTTATGCAGGTGCAAATGGAAACTCCTCGTCGACCTTCTGTGCTCCTGGATCCTTGGAAAACGTGGATGTGACGGGAAAGGTAGTGTTGTGCGAGGTTGGTGGATTCGTTAGAAGTGTAGACAAAGGACAAGAGGTTAAGAACGCTGGTGGAATAGCCATGATCCTCATGAACTCAGTAATTGGAGACTTCAATCCCTTTGCCGAGGTTCACGTTCTTCCTGCTACACACGTAAGCTACCGTGATGGGTTAGCCATCAAAAGTTACATAAACTCAACTTCAACGCCAACAGCAACAATCTTGTTCGGAGGAACCGTTATTGGAAGCCTCTTTGCACCTGCAGTTACTTCCTTTTCCTCAAGGGGTCCGAGTTTTGCGAGCCCGGGAATTCTGAAGCCTGACATCATTGGTCCAGGACAGAACATTCTAGCTGCATGGCCCGTGTCTTTGGACAACAATGTGCCTTCGTTCAACATCATTTCTGGCACATCAATGTCTTGTCCTCATCTTGCTGGCATTGCTGCTTTGCTTAAAAATTCTCATCCAGATTGGTCTCCTGCTGCCATAAAATCAGCAATCATGACGACTGCTAATACAGTGAACCTTGGAGGGAAGTCCATATTGGATCAAAGGCTTCTACCGGCTGATGTTTTTGCCACAGGAGCTGGACATGTTAACCCTTTGAAGGCCAACGATCCCGGGCTTGTTTATGATCTTCAACCAAATGATTACATTCCTTATTTGTGTGGCTTGAATTACACTGACAAAGAAATTGGACTGATTTTGAACCAAAATGTGGACTGCTCCGAGGTGAAAACCATACCGGAAGCTCAACTCAATTATCCCTCGTTTTCAATTCAGTTGGGATCAACTCCACAGTTCTACACTAGAACACTTACAAATGTTGGAGCCACCAATGTAACCTACTTTTCCGAAATGGACCCACCTTTGGGAGTAGGCATAAGCATAAGCCCTGCTAAGATAACATTCACAGAGGTGAAGCAGAAGGTTACATACACTGTTGGATTTATTCCTGGGGACGCAAAGAATAGAGGGAATCACACGTTTTCTCAAGGTTCTATCAGGTGGGTATCTGGTAAATACTCTGTTAGCATCCCTGTAGCTGCTGTTTTCCTATGA 1509 0.4566 MYKVCDLSGCLESAILAGMDTAIEDGVDVLSLSLGGPSFPFFDDPIALGAFSAIQKGIFVSCSAGNSGPDYASLSNEAPWILTVGASTIDRRILATAKLGNGQLFIGESIFQPHDFTPTLLPLVYAGANGNSSSTFCAPGSLENVDVTGKVVLCEVGGFVRSVDKGQEVKNAGGIAMILMNSVIGDFNPFAEVHVLPATHVSYRDGLAIKSYINSTSTPTATILFGGTVIGSLFAPAVTSFSSRGPSFASPGILKPDIIGPGQNILAAWPVSLDNNVPSFNIISGTSMSCPHLAGIAALLKNSHPDWSPAAIKSAIMTTANTVNLGGKSILDQRLLPADVFATGAGHVNPLKANDPGLVYDLQPNDYIPYLCGLNYTDKEIGLILNQNVDCSEVKTIPEAQLNYPSFSIQLGSTPQFYTRTLTNVGATNVTYFSEMDPPLGVGISISPAKITFTEVKQKVTYTVGFIPGDAKNRGNHTFSQGSIRWVSGKYSVSIPVAAVFL 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00320 502 Pfam Fibronectin type-III domain 401 498 IPR041469 -
Vian10g00320 502 Gene3D - 90 230 - -
Vian10g00320 502 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 498 IPR045051 -
Vian10g00320 502 ProSiteProfiles Serine proteases, subtilase domain profile. 1 354 - -
Vian10g00320 502 SUPERFAMILY Subtilisin-like 1 358 IPR036852 GO:0004252|GO:0006508
Vian10g00320 502 CDD PA_subtilisin_like 96 223 - -
Vian10g00320 502 Pfam Subtilase family 2 323 IPR000209 GO:0006508|GO:0008236
Vian10g00320 502 FunFam subtilisin-like protease SBT1.5 90 230 - -
Vian10g00320 502 Pfam PA domain 122 209 IPR003137 -
Vian10g00320 502 SUPERFAMILY PA domain 139 216 IPR046450 -
Vian10g00320 502 Gene3D - 371 501 - -
Vian10g00320 502 Gene3D Peptidase S8/S53 domain 1 367 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00320 Vian-Chr10 2916570 2918078 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g00320 1 488 Subtilisin-like Serine Gene Family AT1G04110 47.211 1.04e-151 450
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00320 - - gmx:100799902 838.565