Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00284 ATGGTTAGTAACGAGGGCAACGAGGAGGAGAAAGACCTTGAGTTTTTGTTTGAAGATGTTATAAACGACGTCGCACAAAATGATATTGAAACTGCCAAGTTAGAGAGTGAGAGCAGTAGCAGTGATGACGACGAAATTCATCAAACACACTCTCACTCTTTCACTTCTCTCCAATGGCCCCAAAGTTACAAAGAGACTACAGATTCTTATACACTTGCAGCAACTCCACATTTCGAATCAATTCTACGAGTACCAAGTATTATATTGTCCAGTTTTGAAAGTCGTTCAAAGCAGAACTCGCAAATAGATGGAAAGACTCCTTTCCTCTCTAGTCCTGAAGTCACTACCCAATCACCATTGTTGAAGGAAGATGCAGCACAAGGGCATTCAGTAGGCGAATTGCCCGTTAGTCGTGGGTGCAGCTTAATTCAAACAATTTTCAATGCAACTAATGTGATGGCTGGAGTTGGCATTCTCTCAACACCTTATACAATGAAAGAAGCTGGTTGGATTAGCATGGTGTTGATGGTTCTTTTCGCTGTCATTTGTTGCTATACAGCCACCCTTATGAGATACTGCTTTGAAAGCAGAGAAGGAATCAATAGCTACCCAGATATAGGAGAAGCTGCATTTGGAAAATATGGTCGTATTATTGTATCAATCATCTTGTACACGGAATTATATTCATGTTGTGTAGAATTCGTCACCTTGGAAGGAGACAACCTCACTGGACTCTTTCCAGGAACATTCTTAGATTTGGGTAGTTTGCATTTAGATTCTGTGCACTTGTTTGGAATTTTAGCTGCACTTATTTTTATCCCAACTGTTTTGCTGAAGGATCTTCGCATAATCTCTGTACTGTCAGCTGGAGGAGTTTTTGCAACACTGTTGATTGTTATCTGTGTGTATTGTGTTGGGATGATGGATGGTATTGGATTCCATCACAGCACAAAATTTGTCAAGTGGAGTGGCATTCCATTAGCTATTGGTATCCACGGGTTTTGCTTTGCAGGCCATTCAGTTTTTCCAAATATTTACCAATCTATGGCTGACAAAACACAATTTACCAAAGCATTAATTGTATGTTTTGCATTGTCTGTTGCAATATATGGAGGTGTTGCTATCATGGGATTCCTTGAATTTGGCAACGACACTTTGTCTCAAATAACATTAAATTTGCCACGAAATGCATTTGCTTCCCAGGTTGCAATGTGGACAACAGTAATTAACCCATTCACCAAATATGCATTATTGATGACCCCATTAGCAAGAAGTCTGGAGGAGCTGGTACCAGATAGATACTCAAGTAGTAATCGGTGTTTCGTTCTTATCAGAGTTGCACTTGTTGTATCAACAGTTTGTGCCGCTTTTCTGATTCCCTTTTTCGGGTATGTAATGGCTTTAATTGGCTCTCTCTTCAGTATACTTGTGTCAGTGATATTTCCGAGTTTATGTTTTATGAGAATTGTGGGGAAAAAAGCATCGAATACACAGGTTGCGCTGAGCGTGGTAATTACTGCATTTGGAGTCATTTTTGGAGTTCTGGGAACATATTCATCTGTGGTGAGTATTGTGAACAGTTACTGA 1587 0.3989 MVSNEGNEEEKDLEFLFEDVINDVAQNDIETAKLESESSSSDDDEIHQTHSHSFTSLQWPQSYKETTDSYTLAATPHFESILRVPSIILSSFESRSKQNSQIDGKTPFLSSPEVTTQSPLLKEDAAQGHSVGELPVSRGCSLIQTIFNATNVMAGVGILSTPYTMKEAGWISMVLMVLFAVICCYTATLMRYCFESREGINSYPDIGEAAFGKYGRIIVSIILYTELYSCCVEFVTLEGDNLTGLFPGTFLDLGSLHLDSVHLFGILAALIFIPTVLLKDLRIISVLSAGGVFATLLIVICVYCVGMMDGIGFHHSTKFVKWSGIPLAIGIHGFCFAGHSVFPNIYQSMADKTQFTKALIVCFALSVAIYGGVAIMGFLEFGNDTLSQITLNLPRNAFASQVAMWTTVINPFTKYALLMTPLARSLEELVPDRYSSSNRCFVLIRVALVVSTVCAAFLIPFFGYVMALIGSLFSILVSVIFPSLCFMRIVGKKASNTQVALSVVITAFGVIFGVLGTYSSVVSIVNSY 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00284 528 MobiDBLite consensus disorder prediction 35 50 - -
Vian10g00284 528 Gene3D Amino acid/polyamine transporter I 137 527 - -
Vian10g00284 528 FunFam Amino acid transporter AVT1A 138 527 - -
Vian10g00284 528 MobiDBLite consensus disorder prediction 33 55 - -
Vian10g00284 528 Pfam Transmembrane amino acid transporter protein 140 520 IPR013057 -
Vian10g00284 528 PANTHER OS05G0424000 PROTEIN-RELATED 145 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00284 Vian-Chr10 2612113 2616213 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g00284 55 468 Amino Acid or Auxin Permease AAAP Family AT2G41190 64.133 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00284 K15015 - gmx:100816368 836.639