Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00283 ATGAAGCCTCGCACTTCATTATGGTTTCTCTCTTTGATTTACACTCTCTCTTTTGTGGCTTCTGACACTCTGCCCTCTAATGAAGTTTGGGCGCTTAGGAGCTTCAAAGAAGCTGTTTATGAAGACCTATATCAAGTTTTGTCCGATTGGGATACGTTAGAAGCAGAGCCTTGTAACTGGTTTGGGGTCACTTGCACTATGGTGCGAGATCATGTCATCAAGCTAAACATATCAGGATCATCATTAAAGGGGTTTCTTGCACCAGAGTTGGGGCAACTCACCCACTTGCAAGAACTAATTTTGCACGGAAACAATCTCATTGGAACAATACCTAGAGAATTGGGCGAGTTGAAATATCTCAGGGTGCTTGATCTAGGAATGAATCAGTTAACAGGGCCAATTCCTCCGGAGTTTGGAAATCTAACTCAAGTTGTGAAAATAAACTTGCAGTCCAACGGGTTGACTGGTAGGCTACCCCCAGAGCTTGGAAACTTGAGATTCCTTCAAGAACTTCAGCTGGATAGGAATAGACTTCAAGGACCTATTCCTGCTGGCGATAGCTCAAATTTTGCTTCAAATATGCATGGAATGTATGTGTCCAAGGAGAACGTAACTGGCTTCTGTCGTTCGTCTCAGTTGAAAGTAGCAGACTTCTCATATAATTTTTTAGTTGGTAGCATACCCAAATGCTTGCAGTATCTTCCGAGATTAAGCTTTCAAGGGAATTGCATCCAGAGCCAGGATATAAAGCAGCGACCTCCTATACAGTGTGCGGGTGCTTCTCCTGCCAGTGCCAAGAGTCAGCCAGTGGTGAATCCAAGTCACCAACCTACTGAATATGTGTCCAAGCATCACGGAGCGTCAAAACCTGTTTGGCTTTTGGCTCTAGAAATAGTAACTGGGACTATGGTGGGCTCTCTCTTTCTGGTTGCTGTTCTTGCTGCTTTTCAGAGATGTAACAAAAAATCATCTATCATTATTCCTTGGAAAAAATCTGGAAGCCCGAAAGATCAGACGGCAGTATATATAGACCCTGAGATGTTGAAGGATGTGAGAAGGTATAGCAGACAAGAGCTTGAAGTGGCCTGTGAAGACTTCAGCAACATAATTGGGTCCTCTCCAGACAGTGTGGTTTACAAGGGAACAATGAAAGGTGGACCTGAGATTGCTGTGATTTCCCTCTGCATCAGGGAGGAGCATTGGACAGGATATCTTGAACTCTATTTTCAGAGAGAGGTAAATGGAAATTTTCCTATGGCAACAGCCTGCAAGAATTTGCGGACAGATAGTTGTCCCAATCTTTTAATATTTACTTATGCTCTTAATGCCATTCAGGTGGCAGACTTGGCAAGGTTAAATCATGAGAATATAGGAAAACTACTTGGTTACTGTAGAGAAGACACTCCATTTACAAGGATGTTGGTTTTTGATTATGCTTCAAATGGGACACTTCATGATCACCTTCATTGTTATGAAGAAGGATGTCAATTCTCGTGGACACGGCGTATGAAGATTGCCATAGGCATTGCGCGTGGACTCAAGTATTTGCATACCGAAGTGGAGCCTCCATTTACTATCTCAGAGCTGAATTCTAGTGCTGTATACCTTACAGAAGAATTTTCCCCTAAGCTGGTCGATTTTGAAAGTTGGAAAACAATTCTTGAAAGATCAGAAAAGAATTCTGGTTCCATTGGCAGCCAAGGTGCTATCTGTGTTCTTCCAAACTCCCTTGAAGCACGCCATCTTGATACCAAAGGAAACATATTCGCTTTTGGGGTACTTCTACTGGAGTTAATTAGCGGAAGACCTCCGTACTGTAAGGACAAAGGATACTTGGTTGACTGGGCCAAGGACTACCTCGAAAGGCCAGACGAAATGTCAAGCGTGTTGGATCCTGAACTGAAGCATTTTAGACATGAAGACCTCAAAGTGATATGCGAGGTAATAACTCTCTGTATCAACCCTGATAAAACTGAGCATCCATCTATGAGAGAATTATGTAGCATGCTGGAGAACAGAATTGATACATCAGTAAGCGTGGAGCTTAAGTCGTCATCTTTGGCTTGGGCCGAACTTGCACTTTTATCTTAA 2091 0.429 MKPRTSLWFLSLIYTLSFVASDTLPSNEVWALRSFKEAVYEDLYQVLSDWDTLEAEPCNWFGVTCTMVRDHVIKLNISGSSLKGFLAPELGQLTHLQELILHGNNLIGTIPRELGELKYLRVLDLGMNQLTGPIPPEFGNLTQVVKINLQSNGLTGRLPPELGNLRFLQELQLDRNRLQGPIPAGDSSNFASNMHGMYVSKENVTGFCRSSQLKVADFSYNFLVGSIPKCLQYLPRLSFQGNCIQSQDIKQRPPIQCAGASPASAKSQPVVNPSHQPTEYVSKHHGASKPVWLLALEIVTGTMVGSLFLVAVLAAFQRCNKKSSIIIPWKKSGSPKDQTAVYIDPEMLKDVRRYSRQELEVACEDFSNIIGSSPDSVVYKGTMKGGPEIAVISLCIREEHWTGYLELYFQREVNGNFPMATACKNLRTDSCPNLLIFTYALNAIQVADLARLNHENIGKLLGYCREDTPFTRMLVFDYASNGTLHDHLHCYEEGCQFSWTRRMKIAIGIARGLKYLHTEVEPPFTISELNSSAVYLTEEFSPKLVDFESWKTILERSEKNSGSIGSQGAICVLPNSLEARHLDTKGNIFAFGVLLLELISGRPPYCKDKGYLVDWAKDYLERPDEMSSVLDPELKHFRHEDLKVICEVITLCINPDKTEHPSMRELCSMLENRIDTSVSVELKSSSLAWAELALLS 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00283 696 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 25 189 - -
Vian10g00283 696 Pfam Leucine rich repeat N-terminal domain 27 65 IPR013210 -
Vian10g00283 696 MobiDBLite consensus disorder prediction 255 280 - -
Vian10g00283 696 MobiDBLite consensus disorder prediction 261 280 - -
Vian10g00283 696 ProSiteProfiles Protein kinase domain profile. 364 674 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian10g00283 696 Pfam Protein tyrosine and serine/threonine kinase 449 669 IPR001245 GO:0004672|GO:0006468
Vian10g00283 696 PANTHER PROTEIN MALE DISCOVERER 2 12 696 - -
Vian10g00283 696 Gene3D Ribonuclease Inhibitor 27 139 IPR032675 -
Vian10g00283 696 SUPERFAMILY L domain-like 26 238 - -
Vian10g00283 696 SUPERFAMILY Protein kinase-like (PK-like) 343 671 IPR011009 -
Vian10g00283 696 Gene3D Phosphorylase Kinase; domain 1 350 478 - -
Vian10g00283 696 Gene3D Ribonuclease Inhibitor 140 261 IPR032675 -
Vian10g00283 696 Gene3D Transferase(Phosphotransferase) domain 1 479 686 - -
Vian10g00283 696 Pfam Leucine rich repeat 95 154 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00283 Vian-Chr10 2597469 2601648 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g00283 41 675 Receptor kinase-like Gene Family AT5G45780 27.752 8.02e-51 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Vian10g00283 PK_Tyr_Ser-Thr 3.5e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00283 - - gmx:100794714 1191.41