Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00244 ATGAGTAGCAAAGGAAAAGAGGAAGAAGGGATTAAGAAGGTTATGATTCACGGAGGTCGATACGTGCAGTACAACGTTTATGGACACTTGTTCGAGGTACCCTCCAAGTATGTCCCTCCGCTTCGTCCCATCGGAAGGGGCGCATACGGCGTCGTTTGTGCTGCTGTTAATTGCGATACGCACGAGGAAGTTGCCATAAAGAAGATTGCTAACGCCTTTGACAACATCATTGACGCTAAACGGACTTTGAGGGAGATTAAGCTCCTTCGCCACATGGACCATGAAAATATAATTGCTGTTAGGGATATCATACGACCTCCAAGAAAGGATGCCTTCAATGATGTTTACATTGTTTATGAATTGATGGACACTGACCTTCACCACATTATTCGTTCTGATCAACCTCTTAACGACGACCATTGTCAGTACTTTCTATATCAGCTTTTACGGGGGCTGAAGTATGTGCATTCGGCTAATGTCTTGCACCGAGATCTTAAGCCCAGTAATTTGCTTCTGAACGCGAACTGTGACCTTAAAATTGCTGACTTTGGTTTGGCAAGGATAACATCTGAAACCGATTTCATGACGGAGTATGTGGTCACCCGGTGGTACCGTGCCCCGGAATTGCTCCTCAATTGTTCGGAGTACACCTCTGCAATTGACGTTTGGTCTGTTGGTTGCATATTTGGTGAAATTTTGACCAGGGAACCCTTGTTTCCTGGGAAAGATTATGTTCATCAACTAAGGCTTATAACGGAGTTATTAGGTTCACCAGATGATGCTAGTCTTGCATTTCTCCGAAGTGAAAATGCTAAAAGATATATTCGACAGCTTCCCCATTATAGGAAGCAAAATTTCTCGGCTAGATTCCCAAGTATGTCTCCTGAGGCATTGGATTTACTAGAGAAGATGCTTATCTTTGATCCCAACAAACGCATTACAGTTGATGAAGCACTGTGTCACCCATACCTTTCATCACTTCATGACATCAATGATGAACCAGTTGGTCCTGGGCAATTCAATTTTGATTTTGAGCAGCCAACATGCACTGAAGAGCACATCAAGGAGCTCATCTGGAGGGAATCAGTGAAATTCAATCCGGATCCACCCAGTCAGTAA 1119 0.4379 MSSKGKEEEGIKKVMIHGGRYVQYNVYGHLFEVPSKYVPPLRPIGRGAYGVVCAAVNCDTHEEVAIKKIANAFDNIIDAKRTLREIKLLRHMDHENIIAVRDIIRPPRKDAFNDVYIVYELMDTDLHHIIRSDQPLNDDHCQYFLYQLLRGLKYVHSANVLHRDLKPSNLLLNANCDLKIADFGLARITSETDFMTEYVVTRWYRAPELLLNCSEYTSAIDVWSVGCIFGEILTREPLFPGKDYVHQLRLITELLGSPDDASLAFLRSENAKRYIRQLPHYRKQNFSARFPSMSPEALDLLEKMLIFDPNKRITVDEALCHPYLSSLHDINDEPVGPGQFNFDFEQPTCTEEHIKELIWRESVKFNPDPPSQ 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00244 372 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 37 325 - -
Vian10g00244 372 FunFam Mitogen-activated protein kinase 122 351 - -
Vian10g00244 372 SUPERFAMILY Protein kinase-like (PK-like) 41 332 IPR011009 -
Vian10g00244 372 CDD STKc_TEY_MAPK 31 367 - -
Vian10g00244 372 FunFam Mitogen-activated protein kinase 23 131 - -
Vian10g00244 372 Pfam Protein kinase domain 42 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian10g00244 372 Gene3D Transferase(Phosphotransferase) domain 1 122 351 - -
Vian10g00244 372 Gene3D Phosphorylase Kinase; domain 1 21 361 - -
Vian10g00244 372 ProSiteProfiles Protein kinase domain profile. 38 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian10g00244 372 ProSitePatterns MAP kinase signature. 73 176 IPR003527 GO:0004707|GO:0005524|GO:0006468
Vian10g00244 372 ProSitePatterns Protein kinases ATP-binding region signature. 44 68 IPR017441 GO:0005524
Vian10g00244 372 SMART serkin_6 38 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian10g00244 372 ProSitePatterns Serine/Threonine protein kinases active-site signature. 160 172 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00244 Vian-Chr10 2120614 2123093 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g00244 7 367 MAP Kinase Gene Family AT4G01370 81.163 0.0 630
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Vian10g00244 Pkinase 3.6e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00244 - - gmx:100803024 721.079