Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00222 ATGGCTTCCAATTCTACATCTGGAAATGCTTGCCCGGCGCCTATGAAAGCCACATCAAATGGCGTGTTTCAGGGAGACGACCCTCTTGATTTTGCGCTTCCCCTAGCTATTTTGCAGATATGCCTTGTTCTTGTGGTCTCAAGGGGACTGGCATATCTTCTAAAACCCTTAAGGCAACCCAGAGTTATTGCAGAGATTATTGGAGGGATACTTCTTGGTCCATCAGCTCTTGGACGGAATAAAAGCTATATGCAGGCAGTTTTCCCACCCAGGAGTATTACAGTATTAGACACTCTAGCAAACATTGGCCTTATATTCTTTCTATTCTTAGCAGGCCTGGAGTTAGATCTTAAATCTCTTCGTCAATCTGGAAACCGAGTCCTTGCTATTGCTATGGCTGGAATAAGCCTACCCTTTGTAATAGGAATTGGTTCATCATTTGTTCTAAAACAATCAATTGCCAAAGGTTCAGATAGTGCCGCATTTCTTGTATTCATGGGTGTTGCTCTGTCCATTACTGCATTTCCTGTATTGGCCCGTATTTTGGCTGAGTTAAAACTTCTAACCACAAACGTTGGCAGAACAGCTATGTCAGCCGCAGCAATTAATGATATAGCTGCCTGGATTCTGCTTGCTCTGGCTGTTGCATTGTCAGGCCATGAGCGATCTCCACTTGTGTCATTGTGGGTCTTCTTAGCGGGGTGTGGTTTTGTCATTTGTGCAATAATCATTGTCCCTCCAATTTTCAAATGGGTGAGCCAACGATGCCATGAAGGTGAACCAGTTGAAGAGGTATACATATGTGCTACATTAGCTGCTGTTCTGGCTGCTGGGCTTGTCACAGATGCTATTGGAATCCATGCCATGTTTGGTGCCTTTGTTGTTGGAGTTTTGCTCCCAAATGATGGACCGTTTGCCAGTGCTCTTGTGGAGAAAGTAGAGGATCTTGTGTCTGGTCTATTTCTCCCTCTCTATTTTGTGTCAAGTGGATTGAAGACTAATGTAGCCACCATAAAGGGGCTGCAATCATGGGGTCTTCTGGCTTTTGTTATATTTACAGCTTCTTTTGGAAAGATTCTTGGGACTTTTGTTGTTTCCCTTCTCTGTAAACTACCTTTTAACGAGGCTCTGGTGCTGGGGTTCTTAATGAATTGCAAAGGCCTAGTTGAATTAATAGTCCTGAACATTGGCAAAGATAGAAAGGTTTTGAATGATCAGACCTTCGCCATCATGGTTCTTATGGCTGTTTTCACTACCTTCATCACCACTCCTCTTGTGATGGCCGTGTATAAGCCTGCAAGGAAGGGAGGAATAGCTGACTACAAATATAGAACAATTGGGAGGAAAAATGCAAATAGACAACTGAGGATTCTCGCCTGCTTCCATGGTGCAAGAAATATTCCATCAATGATAAATTTGATTGAGGCTTCAAGAGGAATCCAGAAGCGTGATGATCTTTGTGTGTATGCAATGCACCTTAAAGAATTCTCTGAGAGGTCCTCATCTATATTAATGGTACATAAGGCAAGAAGAAATGGGTTGCCATTCTGGAACAAAGGTTCTCATTCACCTTCTAACCATGTTATTGTAGCGTTTGAGGCTTACAGGCAACTAAGTCAAGTGTCCATCCGGCCAATGACCGCCATCTCATCTATGGCTAACATACATGAAGACATTTGTGCAACTGCTGAGAGGAAGGAAGCCGCAGTCATCATTCTTCCATTTCATAAGCATCAAAGTTTGGATGGTTCACTACATAACACTAGAAATGATTTTCGATGGGTTAACAAAAGAGTACTTGAGCATGCACCATGCTCAGTTGGAATTTTTGTTGATCGGGGGCTCGGTGGTACCTCCCATGTCTCTGCAAGTAATGTTTCTTACCGTGTTACAGTGCTTTTCTTTGGTGGTGGTGATGATCGTGAAGCCCTTGCTTACGGAGGTCGTATGGCTGAGCATCCTGGCATCAGATTGTTGGTTATTCGCTTTGTAGTTGAACCACCTAATGAAGCAGAGATTTTAAGAGTTGATGTGGGTGACTCCTCCTCCAGCACCAAATTAGTCTCACAGGATGAGCAATTCCTCGATGAATTTAAAGTGAAAACAGCCAATGATGACTCCATCAACTATGAAGAGAGAATAGTTAAAAATGCAGCAGAAACAGTTGCTATTATCCGTGAGGTTAATAGCTCGAGTCTGTTTCTTGTGGGTTCAAGGCCAGTCAGTGAAGTTGCCTGTGCTCTGAAAAGCAGTGAATGCCCTGAACTAGGACCTGTGGGTGGTTTGTTGGTATCACAAGATTACCCCACAACAGCATCCGTTTTGGTAATACAACAGTATAACAACGATGGGGCGCCAATAAATTTGACGCCGGAAATGGAGGAACAATTACCCTATCAGGATTCAGGTTCTGCTGCATAA 2421 0.4337 MASNSTSGNACPAPMKATSNGVFQGDDPLDFALPLAILQICLVLVVSRGLAYLLKPLRQPRVIAEIIGGILLGPSALGRNKSYMQAVFPPRSITVLDTLANIGLIFFLFLAGLELDLKSLRQSGNRVLAIAMAGISLPFVIGIGSSFVLKQSIAKGSDSAAFLVFMGVALSITAFPVLARILAELKLLTTNVGRTAMSAAAINDIAAWILLALAVALSGHERSPLVSLWVFLAGCGFVICAIIIVPPIFKWVSQRCHEGEPVEEVYICATLAAVLAAGLVTDAIGIHAMFGAFVVGVLLPNDGPFASALVEKVEDLVSGLFLPLYFVSSGLKTNVATIKGLQSWGLLAFVIFTASFGKILGTFVVSLLCKLPFNEALVLGFLMNCKGLVELIVLNIGKDRKVLNDQTFAIMVLMAVFTTFITTPLVMAVYKPARKGGIADYKYRTIGRKNANRQLRILACFHGARNIPSMINLIEASRGIQKRDDLCVYAMHLKEFSERSSSILMVHKARRNGLPFWNKGSHSPSNHVIVAFEAYRQLSQVSIRPMTAISSMANIHEDICATAERKEAAVIILPFHKHQSLDGSLHNTRNDFRWVNKRVLEHAPCSVGIFVDRGLGGTSHVSASNVSYRVTVLFFGGGDDREALAYGGRMAEHPGIRLLVIRFVVEPPNEAEILRVDVGDSSSSTKLVSQDEQFLDEFKVKTANDDSINYEERIVKNAAETVAIIREVNSSSLFLVGSRPVSEVACALKSSECPELGPVGGLLVSQDYPTTASVLVIQQYNNDGAPINLTPEMEEQLPYQDSGSAA 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00222 806 FunFam Cation/H(+) antiporter 15 35 436 - -
Vian10g00222 806 Gene3D - 35 436 IPR038770 -
Vian10g00222 806 PANTHER CATION/H + ANTIPORTER 10 781 - -
Vian10g00222 806 Pfam Sodium/hydrogen exchanger family 42 425 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vian10g00222 806 Gene3D - 521 754 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00222 Vian-Chr10 1956881 1960044 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g00222 1 804 Antiporter Super Family AT5G41610 68.804 0.0 1098
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00222 K26731 - gmx:100810155 1370.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00222 10 1956881 1960044 Vian10g00222 10 1956881 1960044 ECH