Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00215 ATGGCATCACTAAATAAACTGAACAACGGCAGCAAGCAACAAGAAGCCAGTAAGAAAACACATACAAGGAAAACCCGAAAAAACAAGATTTCGAGTGCCGGAATGGAACAGTTCCGGCATATCGGAGAGGTAGTTGGGAGTCTGAAAGCGCTTATGGTTCTGCGCGATGAAATCCAAATCAACCAACGGCAATGCTGTTTGATCCTGGACATATTCAGTTTGGCGATGGACACGATCGCAGAGGAGATGCGGCAGAACCTGAAGCTGGAAGAGAGGAACAGCAAATGGAAGGCTCTGGAATCTCCTCTGACAGAGTTGTGCAGGGTTTTCAAGGAGGGAGAGCATTACATAAAGCAGTGTTTGGATTCCAAACATTGGTTGGGGAAAGCCATTACCCTCTCTCACCACCGAGACTGCGTGGAATTCCACATCCACAACCTTCTCTGCTATTTCCCGGCGGTGATCGAGGCGATCGAGATTGCAGGGGAGATTACGGGTTTAGATCCGGAGGAGAAGGCAAAGAAGAAGGTGATACTGGGTCGGAAGTATGACGTGGAATGGAAGGACCCGGAGCTGTTCCAATGGAGGTTCGGGAAGCAGTACCTGGTCCCGCGCGGGATTTGCAAGAAGTTGGAGAACGCCTGGAGAGAGGACAGGTGGAGGCTCATCGAGGCCATCAAGGACAAGACTGCGAAGGAAGGTGGTTCAGCTGTGTTTAGGGAGAGCGAGCATGGCCTCGCTGATATGCTCCTCAAAAAGCTTCTCAATGGGTCGGAGATCGGCCCAATTGCGGTGCTTGTTGGGTCCAAAGGTTTCCAGGAGAGACGGAGGTTGGGCCACCGGAAGGACTTCAAGGAAATCCAATGGTTGGGGCAAAGTTTCGCGATGAGGAACTTTCAAGGGGAGAGAGAAGCACACCAGACTGAGGTCTCCTCTATTCTCTCGCTTTCACACCCCAACATATTGCAATACCTTTGCGGGTTTTACGACGAGGAGAAGAAAGAGTTCTCTTTTGTGATGGAGTTAATGCAAAAGGATCTGTGGACTTACATGAAAGAGATTTGTGGTCCTAGGAGGCAGATTCTATTCTCTATCCCTGTTGTGGTGGATCTCATGCTTCAGATGGCCAGAGGAATGGAGTACCTGCATTCCCAAAACATTTTCCATGGACAACTTAACCCTTGTAATATTTACCTCAAAAAAATGAACTCCCAAGAGGATTATTTTCAGGCAAAGGTTGCAGGCTTTGCCTTGTCTTCTGTCAACAATGCTAGTCCTGACGATACTGCCATCCAAGACTTTAACCCTTTAACCTGGTATGCTCCTGAAGTTCTGTCCCGTTTGGAACAAAATAATGGTGGTGCTTCTTCTAAGGAAGCCGATGCCTACAGCTTTGGGATGATATGCTTCCAGTTGTTGACAGGAAAAGTGCCTTATGAAGATAACCACCTTCAAGGAGACAGAATTAGACAAAACATAAAGGTCGGTGAGAGACCTTTGTTTCCTCACCGTTCCCCGAAATACCTTGTGAATTTGATCAGGAAGTGCTGGCAAGCTGACCCTGGTCAGCGTCCCAGCTTCTCCTCCATCTGTAGGATTTTGCGGTACACCAAAAAATTCCTTGCCATGAACTCAGAGGCCCAACTCATCAACCCTGAGCTCAACTTTCTTGAGGTTCCGCCTGTGGATTGCTTTGAGATAGAGACAACGTTCCTAAAGAGCTCTTCAACCGAGAGGTCATCTTGTGTGTCCGCTGTGTCCCAGATACCCTATGAAATGTTTGCTTATAAGGTTGTGGAGAAAGAGAAAATGAATCCTAACAACAGTACTACCAAAGATGAATGCTGCGAGCACCACCAAAAGGATGTGTGTAGGAGTGAAAGTGATGACCCAAGTACAGAGTGCGATGATGATAACGCCTCCATAGTGAAAGATCCGCTCCCTCAAACAACCCATCCTACATCAGTTTGCAGTGACGCACAGTTTGTTTCCTCAGAATTCCCTTACAAGAAAACGGTTAGAATAAAGAACCAAACACACGTGAAGGCAAAGAATGAACAAGAAAAACAAATATTGCGGAAGACAAAATCATTTCGACCTTCTTTATCGAATCGAGTTTCAAGGACGAGAAAGGTGAATACACCATCATTGCCACCAAGCAATTTGAGTCCAAGTAAAAGACTATCTTTCCTGGGGTCTCAATCGGATCGCAACTCCAAAGGGAATCGATCAGCGTCACCACCAGCATTACCATCAGCATCACCATCACTACCCATTCCTTCAAGGAAAAAACACGATGGCCATTTGTCGGAAACTAAGACCAGTGTAAGGTTGAAAAAAATGGATCAGTCGACATTACCTAGATATGGCAGCATGACAGATAGTTTAAGGATGAAGAAGTCACAAATGACGTTGAACCAATCTTTGAGCGCGGGAAGAATGAGACGTGCCAACACTGAGATCGATTTGAAGGGGCTCACGCGAACCAATCTACTGAGCACTCCAAGAACATCCACAAGGAGCAGAAAAGGTGGTAATGTCTCAGTTTCGGACAACGGTTCAAGGATGTCAACAGGTGGGTTTTCGCCGTGGGCATTGAGTCCCAAAGCCCCCATTTAA 2619 0.4689 MASLNKLNNGSKQQEASKKTHTRKTRKNKISSAGMEQFRHIGEVVGSLKALMVLRDEIQINQRQCCLILDIFSLAMDTIAEEMRQNLKLEERNSKWKALESPLTELCRVFKEGEHYIKQCLDSKHWLGKAITLSHHRDCVEFHIHNLLCYFPAVIEAIEIAGEITGLDPEEKAKKKVILGRKYDVEWKDPELFQWRFGKQYLVPRGICKKLENAWREDRWRLIEAIKDKTAKEGGSAVFRESEHGLADMLLKKLLNGSEIGPIAVLVGSKGFQERRRLGHRKDFKEIQWLGQSFAMRNFQGEREAHQTEVSSILSLSHPNILQYLCGFYDEEKKEFSFVMELMQKDLWTYMKEICGPRRQILFSIPVVVDLMLQMARGMEYLHSQNIFHGQLNPCNIYLKKMNSQEDYFQAKVAGFALSSVNNASPDDTAIQDFNPLTWYAPEVLSRLEQNNGGASSKEADAYSFGMICFQLLTGKVPYEDNHLQGDRIRQNIKVGERPLFPHRSPKYLVNLIRKCWQADPGQRPSFSSICRILRYTKKFLAMNSEAQLINPELNFLEVPPVDCFEIETTFLKSSSTERSSCVSAVSQIPYEMFAYKVVEKEKMNPNNSTTKDECCEHHQKDVCRSESDDPSTECDDDNASIVKDPLPQTTHPTSVCSDAQFVSSEFPYKKTVRIKNQTHVKAKNEQEKQILRKTKSFRPSLSNRVSRTRKVNTPSLPPSNLSPSKRLSFLGSQSDRNSKGNRSASPPALPSASPSLPIPSRKKHDGHLSETKTSVRLKKMDQSTLPRYGSMTDSLRMKKSQMTLNQSLSAGRMRRANTEIDLKGLTRTNLLSTPRTSTRSRKGGNVSVSDNGSRMSTGGFSPWALSPKAPI 872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00215 872 MobiDBLite consensus disorder prediction 832 872 - -
Vian10g00215 872 MobiDBLite consensus disorder prediction 1 15 - -
Vian10g00215 872 MobiDBLite consensus disorder prediction 761 777 - -
Vian10g00215 872 MobiDBLite consensus disorder prediction 1 32 - -
Vian10g00215 872 Pfam Protein of unknown function (DUF1221) 55 269 IPR010632 -
Vian10g00215 872 SUPERFAMILY Protein kinase-like (PK-like) 297 555 IPR011009 -
Vian10g00215 872 Gene3D Transferase(Phosphotransferase) domain 1 272 554 - -
Vian10g00215 872 MobiDBLite consensus disorder prediction 696 750 - -
Vian10g00215 872 MobiDBLite consensus disorder prediction 832 861 - -
Vian10g00215 872 MobiDBLite consensus disorder prediction 679 695 - -
Vian10g00215 872 Pfam Protein tyrosine and serine/threonine kinase 302 533 IPR001245 GO:0004672|GO:0006468
Vian10g00215 872 MobiDBLite consensus disorder prediction 678 777 - -
Vian10g00215 872 ProSiteProfiles Protein kinase domain profile. 261 541 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian10g00215 872 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 258 535 - -
Vian10g00215 872 MobiDBLite consensus disorder prediction 623 655 - -
Vian10g00215 872 FunFam Kinase family protein 269 547 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00215 Vian-Chr10 1884869 1891536 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g00215 309 534 MAP Kinase Kinase Kinase AT5G58950 28.571 1.21e-23 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_Gdt Vian10g00215 PK_Tyr_Ser-Thr 1.3e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00215 - - vum:124844837 1632.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00215 10 1884869 1891536 Vian10g00215 10 1884869 1891536 ECH