Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00187 ATGGAATCAGTGTTTCAAGAAGAAGGGTCATCTTCTGTAACTTCTTCCCCCCTTCAGTTCTTTTCCATGATGTCTCTTTCACCTGGCATAGGATCTCCCTATCCTTGGCTTAGAGAACTGAAATCTGAGGAAAGGGGTTTGTATTTGATCCATTTGTTGATCGGTTGTGCCAATCAGGTGGCTAATGGTAGTCTTGAAAATGCAAACATGTTGCTTGAACAGATTTCCCAGCTTGCTTCCCCTGATGGAGATACTATACAGCGAGTTGCTGCATATTTCACCCAAGCACTCGCTGATCGGATACTGAAAACATGGCCTGGTCTCCATAGGGCACTCAATTCCACCAGAATAGCTATGGTGTCTGAAGAAATTCTTGTTCAGAAGCTCTTTTTCGATCTTTTTCCGTTCTTGAAGATGTCATACATTCTGACAAATCAGGCTATTGTTGAAGCCATGGAAGGGGAGAAAATGGTGCATGTAATTGATCTCAATGCCACAGGCCCAGCACAGTGGGTTGCCCTCTTCCGTGTTCTGAGCGCACGCCCTGAAGGCCCTCCTCATTTGAGAATTACTGGGGTGCATCACCAGAAAGAGGTTCTGGATCAGATGGCTCATAAACTCACTGAGGAGGCAGAAAAGTTGGATATCCCATTCCAGTTCAACCCTGTTGTCAGCAAGATAGAAAATCTTGATTTTGACAAACTTCGTGTGAAAACTGGGGAGGCACTGGCAATCAGTTCCATTCTGCAGTTACACTCCCTTTTGGCCTTGGATGACGATGCCTCCAGGAGAAGATCTCCTCTTCCGGCAAACAATTCAAACGCAATTCAACTGCAGAAAATCCTGCAGATGAACCCAAACACACGCTGTGATTTGGTTGATAAGGACATGGTTCACGGCTATAGCCCAAGTCCAGATTCAGCCTCAGCCTCAGCTTCAGCCTCATCCTCGCCAGGATCGTCATCTGCATCAATGAAATCCGAGAGCTTTCTGAATGCCCTGTGGGGGTTATCACCAAAGATCATGGTTGTAACGGAGCAAGACTTCAACCACAACAGTTCAAACCTGATGGATAGGCTGCTAGAATCTCTAAATTCTTATGCTGCATTGTTTGATTGTTTGGAATGCACTGTCTCCAGAGCATCCTTGGATAGAATGAAGATCGAGAAGATGCTTCTGGGTGAGGAAATCAAGAACATAGTAGCTTGTGAGGGAGCTGAAAGAAGGGAAAGGCATGAAAAGATGGATAAGTGGATCCAAAGACTTGATTTATCTGGTTTTGCAAACGTGCCTTTAAGCTGTCAGGGTGTGACACAGGCAATGAGGTTCTTGGAGAACTATGGCTGTAATGGATATAGAATGAGGGAGGAAAATGGCTCTGTAGTCATTTACTGGCAGGATCGAACCTTGTTTTCTGTGACAGCTTGGAGATCAAGAAGGTAA 1443 0.4518 MESVFQEEGSSSVTSSPLQFFSMMSLSPGIGSPYPWLRELKSEERGLYLIHLLIGCANQVANGSLENANMLLEQISQLASPDGDTIQRVAAYFTQALADRILKTWPGLHRALNSTRIAMVSEEILVQKLFFDLFPFLKMSYILTNQAIVEAMEGEKMVHVIDLNATGPAQWVALFRVLSARPEGPPHLRITGVHHQKEVLDQMAHKLTEEAEKLDIPFQFNPVVSKIENLDFDKLRVKTGEALAISSILQLHSLLALDDDASRRRSPLPANNSNAIQLQKILQMNPNTRCDLVDKDMVHGYSPSPDSASASASASSSPGSSSASMKSESFLNALWGLSPKIMVVTEQDFNHNSSNLMDRLLESLNSYAALFDCLECTVSRASLDRMKIEKMLLGEEIKNIVACEGAERRERHEKMDKWIQRLDLSGFANVPLSCQGVTQAMRFLENYGCNGYRMREENGSVVIYWQDRTLFSVTAWRSRR 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00187 480 ProSiteProfiles GRAS family profile. 40 477 IPR005202 -
Vian10g00187 480 MobiDBLite consensus disorder prediction 302 324 - -
Vian10g00187 480 MobiDBLite consensus disorder prediction 304 324 - -
Vian10g00187 480 Pfam GRAS domain family 49 477 IPR005202 -
Vian10g00187 480 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 45 473 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00187 Vian-Chr10 1604536 1605978 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g00187 1 480 GRAS Transcription Factor Family AT1G50420 63.265 0.0 619
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vian10g00187 GRAS 6.2e-134 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00187 - - vun:114174232 801.586