Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vian10g00167 | ATGAAAGGAGAACAAGCACTTAAGAAAATTGAGAATGCCAACAAGAGAAAAGATGTCGATCATTCTGCTAGAGTTAAACGGAAGGTTGACAGTGCTGATGAAGTTGAGCCACAGGATGGGAAAAAAAAGAAAAGAAATAAGTTAAAGGAACGTATTAAAGAGGAAAGTGCTGATGCATCTGGCAATAGCAATGAGACAAATGTTACTGCCCCAGATGAAAAGCATCCAGAGGCTGTCAAAACTACAACCAGCCAGAGTGATGTTTCTCATGCAAAGGATGAAAATGAGGGAAAATTGTCCAATAACGAGGTCGGTGCTGAGAAAAAAAACAAGAAAAAAAAGAAGAAAAAGACGAAGGAGTTAGAAGGGGTAGCTGCTGCAGAGCAAATTACTTCAAGTGCTGAAAAGCAGAATTTGTCTGTTGCCTCAGAGAAAAAGGGGAAGAAACAAACTGAGACCAAGCCTTCTCAAGTGAGAACTTTTCCGAACGGATTGGTTATAGAGGAGCTCCTTATGGGTAAACCTGATGGCAAAAGAGCTGCTCCTGGAAAAAAGGTCGGTGTTAAATATATTGGCAAGCTGCAAAAGGATGGAAAAATATTTGACTCAAATGTGGGAAGAGCACCCTTTAAATTTCGCCTGGGTGTAGGACAAGTCATCAAAGGGTGGGAGGTTGGGATCAATGGGATGAGGATCGGGGACAAAAGAAGGATCACAATTCCACCATCTATGGGATACGCAGATAAGCGCGTTGGGACTATACCACCAAATGCGTGGCTTGTATTTGATGTTGAGTTGGTTGATGTTGATCGTTAA | 816 | 0.4179 | MKGEQALKKIENANKRKDVDHSARVKRKVDSADEVEPQDGKKKKRNKLKERIKEESADASGNSNETNVTAPDEKHPEAVKTTTSQSDVSHAKDENEGKLSNNEVGAEKKNKKKKKKKTKELEGVAAAEQITSSAEKQNLSVASEKKGKKQTETKPSQVRTFPNGLVIEELLMGKPDGKRAAPGKKVGVKYIGKLQKDGKIFDSNVGRAPFKFRLGVGQVIKGWEVGINGMRIGDKRRITIPPSMGYADKRVGTIPPNAWLVFDVELVDVDR | 271 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vian10g00167 | 271 | MobiDBLite | consensus disorder prediction | 87 | 108 | - | - | |
| Vian10g00167 | 271 | MobiDBLite | consensus disorder prediction | 1 | 58 | - | - | |
| Vian10g00167 | 271 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 183 | 270 | IPR001179 | GO:0003755 | |
| Vian10g00167 | 271 | PANTHER | FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA | 41 | 270 | - | - | |
| Vian10g00167 | 271 | MobiDBLite | consensus disorder prediction | 1 | 157 | - | - | |
| Vian10g00167 | 271 | FunFam | Peptidyl-prolyl cis-trans isomerase | 157 | 271 | - | - | |
| Vian10g00167 | 271 | SUPERFAMILY | FKBP-like | 156 | 269 | - | - | |
| Vian10g00167 | 271 | Gene3D | - | 122 | 271 | IPR046357 | GO:0003755 | |
| Vian10g00167 | 271 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 178 | 267 | IPR001179 | GO:0003755 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vian10g00167 | Vian-Chr10 | 1468891 | 1470663 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Vian10g00167 | 183 | 267 | Calmodulin-binding Proteins | AT5G48570 | 51.724 | 2.00e-18 | 82.8 |