Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00134 ATGGACCCTTTTGATGATCTTCTACCTGAGGCTCCTGTTGCACGCATTCGGCCGGGTGCCAAGTTTGCTCCAAAGGCCAAAGCGAAACAGCGGCCACGAAAGGAAGTACCTTCGTCGGAACATGCCACCTCATCTAAAGATGCTGGGAATCAATGTCAAAATGTAGGTCCTTCCACGCTAAATGTGCCAGCGAAAGAATATGTGGGATTCATTCATCATACGCAGGTACACTTTCCAAATTCTGAAAGTGGAAATCCTGAACAAGTTAGTGTGGAGGGAGATAGTGCAGCCTTGGTGGACGGTTCCACAATCACAGCATCTGATATTGGTGCTGGTCAGAATTCTACAAACTTCTTAGAATCAGTATGTGAGGCTGGTCCAACAGATTTTGACGGGGACTCAGTCACTAACTTCGTTTCTGAAACCAACCTCAACAATGGCACGGATTTGGGCTTCGAAAGTGTTTCAGCTAATAAAGTTGCAATAACTCAGACAGTTGATTCAAAGTCAAACATTGGGAAAGAACCAGAGGTAGTATCTGCAGAGATTGAATTGGATCCTTTCAGTGACATCCTCCCTGATCTTCCTGCTAGGAATGTTCATAAATTTAAACCCAAGATCAAGCCACGACCTAGAGTAGGCAATATGCCGGCTTCTGCTTCATGTGATGTTATGATGGAAAAATCTGTTGAGTTGCCTACTTCATACTCAACGGACTTTCAATCTTTTCAGTCTACTAGTGTACTAAACCAATCAACCAGTTTACCTTTGCCAACGTCAGAGATTCTTAGGAAGACTTATATGCCCGATAAGTTTGGTAACACAAGCTCAAATGTTTCAATATCTGAAGACAGTAAGAGCTTGGCAGCAGCAATTCCTTCCCAATTGGATTCCCTAAATGCTATGCTTTCAGGGGACGCAGTTCATAATGGTACTAGAGATTGGCCTTCTACCTTTGGTAAATCATCTGGAGAGGCTGCAGACATTTTTTCTGGGTTGGAATCCCTTGATGACTTTCTCACCCAAGCTACTACTGATACAGGAAAACCGGCTCTTCATTCTTTCAATGAGAAGGGTGCAGAGGAAAATTTTGTCACACCTGTTTGTAGTTCTATTAACTCCTTTACGGAATGTGATAATACCCAAGTTCAAAGATGTCCTGAATATCATACACCGCAAGATCCAGTAACCTTCAATGAAGCTACTGATCTCAATGAGAGTGACACTCACACTAAGAATAGAATGTCGGAAACAGAGGAAATTGAGGACCTGAATCCCGCCTATCCAAGAGATGATGTTTTTGATTATCAATCCATGAAATCTGGTGAAGATCCAACTTATGGAATTCCAGTGCATGAAGACTTGACAAATGCTGCTGACAGTTCCACATTGGCTGATTTTTTGCATGCAAATGATTCAAGGGAAAAAGAAGTTGCTAATCAAAGGAAAAGGGATGGCTCAGACTCATGTTCTCTGAGGAAGAACAAAAGATCTTCTATTTCTGGTGAGGAGGATAATGGTGGTAAAACCTCAAGGCAGCGGAGAAAACTAGCAGCATGTAAACCTAGAAACAGCTCATTCAATGAGGATGTTGAAGATGATAATGACATTGATCCTCCTTATCATTCTAATGAACATGAACTTCAAGAAAATGATGATGACTATGAAGTTGATCATTCATCCAAGAAGAAGAGAGGATCAAAGAGTTCACAGAAGAAATCTGTGGCCAAAAGTGGAAAAACATCTCGAAGGCGTAAGAAGGCTGATGATGATTTACAAAAAACTAAGGAACCTCCAAAAAAGTTCTCTCATTCAACCCGACGAAAGAAAAGATGTGTGGACAAGGCTCTGCTGGAAATTCCTGAGGACGAACTTGATCCTCGAACATTGCCTATAAAAGATATTATTTTACTTGCAGAACACAGGGAGCGGCAAGCGAAAAAAGATGCGATGACTTCAAATATGTCTCCCTCCAATCAAAGTGGTGGAGATTCTCTTCATGGGGCTGGTGCGTATAATGAACAGGAGTTCTCAGGTTCAGAAGATGGTGGAGACCCATATGATGATCAAGACAATGAAAGGATTGATTCAACTCCCGTTCTATACAATTACCATACTTTCATGGAAAAGACACCTAGGGGGAAATGGTCAAAACAAGATACCGAACTGTTTTATGAGGCTATTAGGGAGTTGGGTACAGATTTTTCTATGATACAACAGCTTTTCCCTGATAAAACCCGCCGTCAAATTAAGTTGAAATACAAGAAGGAAGAGCGGGAGCATTATTTACGGTTAAGAGATGCTATACATAACCGTGCAAAAGATCATTCTCATTATAATTTGTTGATTGAACGATTGCAACAATCTTCCACCAAGGCAGAGGAGGTTATGGACCCGACAACAGGAACTAATGAAGAGGTTGTGGAGGCTGCAACAATTAAGCATGATGTGGATGTTAAAGAACAGGAAGTTTCTGCGGCAGTTCAGAGTCCAGAGGAATATGATGACAGTGAGGATGACTCTCTAAAATGGTCTCAGTATAAAAGTCTCTATTAG 2556 0.4151 MDPFDDLLPEAPVARIRPGAKFAPKAKAKQRPRKEVPSSEHATSSKDAGNQCQNVGPSTLNVPAKEYVGFIHHTQVHFPNSESGNPEQVSVEGDSAALVDGSTITASDIGAGQNSTNFLESVCEAGPTDFDGDSVTNFVSETNLNNGTDLGFESVSANKVAITQTVDSKSNIGKEPEVVSAEIELDPFSDILPDLPARNVHKFKPKIKPRPRVGNMPASASCDVMMEKSVELPTSYSTDFQSFQSTSVLNQSTSLPLPTSEILRKTYMPDKFGNTSSNVSISEDSKSLAAAIPSQLDSLNAMLSGDAVHNGTRDWPSTFGKSSGEAADIFSGLESLDDFLTQATTDTGKPALHSFNEKGAEENFVTPVCSSINSFTECDNTQVQRCPEYHTPQDPVTFNEATDLNESDTHTKNRMSETEEIEDLNPAYPRDDVFDYQSMKSGEDPTYGIPVHEDLTNAADSSTLADFLHANDSREKEVANQRKRDGSDSCSLRKNKRSSISGEEDNGGKTSRQRRKLAACKPRNSSFNEDVEDDNDIDPPYHSNEHELQENDDDYEVDHSSKKKRGSKSSQKKSVAKSGKTSRRRKKADDDLQKTKEPPKKFSHSTRRKKRCVDKALLEIPEDELDPRTLPIKDIILLAEHRERQAKKDAMTSNMSPSNQSGGDSLHGAGAYNEQEFSGSEDGGDPYDDQDNERIDSTPVLYNYHTFMEKTPRGKWSKQDTELFYEAIRELGTDFSMIQQLFPDKTRRQIKLKYKKEEREHYLRLRDAIHNRAKDHSHYNLLIERLQQSSTKAEEVMDPTTGTNEEVVEAATIKHDVDVKEQEVSAAVQSPEEYDDSEDDSLKWSQYKSLY 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00134 851 MobiDBLite consensus disorder prediction 565 582 - -
Vian10g00134 851 MobiDBLite consensus disorder prediction 819 851 - -
Vian10g00134 851 MobiDBLite consensus disorder prediction 537 564 - -
Vian10g00134 851 Gene3D - 716 780 - -
Vian10g00134 851 MobiDBLite consensus disorder prediction 471 512 - -
Vian10g00134 851 MobiDBLite consensus disorder prediction 405 429 - -
Vian10g00134 851 MobiDBLite consensus disorder prediction 42 58 - -
Vian10g00134 851 SUPERFAMILY Homeodomain-like 714 760 IPR009057 -
Vian10g00134 851 Pfam Myb DNA-binding like 706 789 IPR039467 -
Vian10g00134 851 MobiDBLite consensus disorder prediction 389 452 - -
Vian10g00134 851 MobiDBLite consensus disorder prediction 650 666 - -
Vian10g00134 851 MobiDBLite consensus disorder prediction 646 694 - -
Vian10g00134 851 MobiDBLite consensus disorder prediction 1 58 - -
Vian10g00134 851 MobiDBLite consensus disorder prediction 471 614 - -
Vian10g00134 851 ProSiteProfiles SANT domain profile. 715 759 IPR017884 -
Vian10g00134 851 MobiDBLite consensus disorder prediction 583 600 - -
Vian10g00134 851 CDD SANT 715 756 IPR001005 -
Vian10g00134 851 PANTHER RNA POLYMERASE III TRANSCRIPTION INITIATION FACTOR B 17 851 - -
Vian10g00134 851 SMART sant 712 760 IPR001005 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Vian10g00134 Myb_DNA-bind_7 1.4e-26 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00134 K15198 - gmx:100792788 1070.84