Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00119 ATGGGGGGTGGAGGAGATGCAACTGGGGTGATGAAAGTTCCCAACGAAGAAGATGATGCTGTTGGAAAGAATGAAGATGAAAAGTGGCCACCTTGGCTTGGGCCACTTCTCCAAACAAGTTTCTTTGTTCAATGCAAAGTCCACGCAGATTCCCACAAAAGTGAGTGTAACATGTATTGTTTGGACTGTAACAATGGAGCCCTTTGCTCTGTTTGTCTTGCTTCTCACAGAGAACACAGAGCTATCCAGATAAGGAGATCTTCATACCATGATGTGATAAGGGTGTCAGAGATTCAAAAATTTGTGGACATAACAGGTGTTCAAAATTACATTATAAACAGTGCCAAGATTGTGTTCTTGAATGAAAGGCCTCAGCCTAGGCCTGGCAAAGGAGTCACCAACACCTGCAAAGTTTGTGAGCGCAGCCTTCTTGATTCATTCAGCTTCTGTTCTCTTGGTTGTAAGATGGTTGGAACCTCCAAGAAGTTCCGGAAGAAGAAAATGTTATCTGAGACAGATGGGTCTGATGGCGAAGAATCAATCAATGGCATCAGCAATGAAAGTGCAAGAATCAAAATCCAGAGCTTCACACCATCAACACCACCACCAACAGTGGTAAATCACAGAACTGCTAAGAGGAGAAAGGGTGTCCCACATAGATCTCCAATGGGGGGTGCCCTTATTATAGAATACCACTAA 699 0.4378 MGGGGDATGVMKVPNEEDDAVGKNEDEKWPPWLGPLLQTSFFVQCKVHADSHKSECNMYCLDCNNGALCSVCLASHREHRAIQIRRSSYHDVIRVSEIQKFVDITGVQNYIINSAKIVFLNERPQPRPGKGVTNTCKVCERSLLDSFSFCSLGCKMVGTSKKFRKKKMLSETDGSDGEESINGISNESARIKIQSFTPSTPPPTVVNHRTAKRRKGVPHRSPMGGALIIEYH 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00119 232 CDD Bbox2 45 84 - -
Vian10g00119 232 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 23 223 - -
Vian10g00119 232 MobiDBLite consensus disorder prediction 194 224 - -
Vian10g00119 232 Pfam PLATZ transcription factor 85 156 IPR006734 -
Vian10g00119 232 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00119 Vian-Chr10 1000911 1002847 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Vian10g00119 PLATZ 2.3e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00119 - - vun:114172978 424.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00119 10 1000911 1002847 Vian10g00119 10 1000911 1002847 ECH