Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00118 ATGACTCAGAACACTGATATGAGACTTGAATCGGGAACTTGCAATGTGTGCTCGGCTCCTTGTTCATCTTGCATGCATCTTAATCATGCTCTCATGGGGTCAAAGGCTGAAGAGTTTTCTGATGAAAACTGTCGCATAGGAGCGGCTATTGATCAGTATTCTATGGATGAGGATAAAGCATGTTCTCTTAGGAGCAGAGCTTGTGAAAGCTCACAACAAACTGTCAGCGAAGCAAGTAATATGCAGAGTGTTAATTCAAGTCAAGATGCTCTGTCTGAAAATGCCAAGAGCAGACAGATCATACTGAATAAGTATCAGGATTCCAAGCATTTAGAAGGCCATGATGACAACACTTCTTGTATTAGTAGATCCAGTGATGCTAATTTAGTGAATGTTAGCCATCAAAGGAATGAAGAACGAATAACAATGCATGAGGAGAGGGATTCATGTTCTCTTGTGTCAGAAAAATTTTCTGAATGCACCATTGAGAATTTTAGTTCTTCATGTACCAAGGAGAGAGAACCTGTTGTTTCTGGTGAGAAATGTACTACGGTTAAGGATGGTCTTATTGAGGGTACTTCCAACATTTCACGAAAGGTATGCCCAAAGTTAGAAGCAGACACTGACGTCTGTGAAGCTAACAATGAAGATCCTAAATATTCAGTTCAAGATGGACAGTGTGAGAAAGCTGCAGAGCTGGTTAAATCGCCTGTGAAGAGGGAAACTCAATCTGAAGATGAGAGTGATGAATCAGATGTTGTGGAACATGATGTAAAGGTGTGCGACATCTGTGGAGATGCTGGTCGGGAGGATCTACTTGCTATATGTAGTAGGTGCAGTGATGGTGCAGAGCACACCTACTGTATGCGAGAAATGCTTGAGAAAGTTCCTGAAGGGGATTGGTTGTGTGAAGAATGCAAAGACGCAGAAGAGAATGAAAATAAAAAACCGGATGTTGAAGACAAAAAAATTGTTGAAGTTAGTTCAACCTCACAAGTTACCGGCAAAAGACTTTCTGATAACATTGAAGTAGCTCCAGCAGCAAAAAGACAAGCTCTTGAATCAAGCACAGGATCGCCAAAGACATCCAGCCCCAAGAGATTAGTTCCACTGTCCCGAGAATCTTCATTTAAGAGCTTAAATAAATCTAAAGTGAAGCCTGGTCTTCTGATACCTAGTCGAAACAACTCTGGTGGTAGTGACATAGAGATTGCTCGCTCTCCTTCCACTGGTCCCAGGGGTCAAACTTCAAAGGGTATGTTAATGAAATCTAATTCATTCAGCAATGTAAATTCCAAGCCAAGAGTCAAACTTGTTGATGAAGTTGTTCCCTCCAAACCAAAAGGGGTTAATGAACATGCTTCAAAGAACATGGAGATGCCTGCTCGAACGACGGTGAAATCAACATTATTCAAATCTCCAAGTTTGGGGAGAACAAATGCAACTGAATCAAAAGTTAAAATGCTTTCACCCAAGTCTGCAGCTGTGCAGGATTTGAAAGGATCTAGGCATTTAAAAGAATCAGGTGCAATTGATAGGAAATTTCCATCTAGGATTGATCGGCCTGTGGTTAGTTCTGTTGTTTCCACTGCTAAGGGTGATCAAAGGCTCACACCTCGTGCTGAATCCAGTAAACCTTCAACAATGAATAACAATCGAGAGTTAAAGGTTAATCAGGATGGAAAAGCAAATGCATTATCAAGGTCAATGAGCAATATTAACCGGAAAAGTCTGGAGCCTCAAATTATTTCAGAGAGAACATCAATCCGTATTGATGAAGCTCAACAGGATGTGCTGCCACGAGCACGGGAGACAGCTAATCAGATTGAGAAAAGCAGAGATAGTTCTAGTGACCGCTTAAGGCCAGCGGTTCCTACTTCAAAACCCCCATTCTGTCAAAAATGTAAGGAATTTGGCCATGCTATGGAATGTTGCAGTGTTGGTACTACACAAGAATCTGGTGCTGAAATATCTGTAACTACGTCAAGTAGTTCAAAAGATGAGATGCATAAAGGCAATATATTGAAAGCTGCTATTCAGGCTGCACTACTGAGAAGGCCTGAAATTTACAAGAAGAAAGAAGTATCTAACCAAACTGATGAGGTTTCTACCTCAGGCACAGATTTAAATTGTGAAGTGACTTCAAATGACCCAGTGTTGGTTTCTAGCACACTGAAGAATAGTATATCTGCTGAAGAAACCCCTGAACAACAGGAAATCCTTGAGAGCTCTACCTCAGATTCTTCCAAATCTTCTTCTGCCAATGATTTTAAGCAACTAAAGTCTTGTCTGACTGATTCTCGATCCCAACCAGGAAAGTCAGCTTCCAATTGTCTTGCAGCTGGAAAACCTGTAGTCAAAGACATGTCTGATAAAGCCGTGACATTGTCGATTGTTCCTTCAAAGATGTTGGCCTTTCCTGAATACGAATACATATGGCAGGGTGCCTTTGAAGTGCATAGAAATGGAAAGCCTCCTGATTTATATACTGGACTTCAGGCGCATTTATCTTCTTGTGCTTCTCCTAAGGTTCTTGGAGCAGTGAACAAATTTCTTCCTAGAGTTTCTTTCAATGAAGCTTCTCGCTTGAGCATGTGGCCTTCACAATTTGATCATGGTGGTGTTACTGAAGATAATATAGCACTATACTTCTTTGCCAGTGATGTTGAAAGTTACGAGAGACACTACAAAGGTCTTTTGGATCGCATGATTAGAAATGATTTAGCGCTTAAGGGAAACTTTGAGGATGTTGAACTGCTGATATTCCCTTCCAATCAGCTTCCTGAAAATTCACAGCGCTGGAATATGTTGTTTTTTTTATGGGGCATATTTAGGGGGAGGAAGATGAATCATTCAGATTCTACAAAAAAGATTTGTATTCCCAGTTTGAACGTAATGCCAGCTGAGGAGAAATCTTCAACTGTTGTTTTGACTGTGCCTGAGATACATTGTTTGGCAAAGTGCAAGGATGAAGAAACAATGGATCGGCATAGATCATGCAATGCACTTGTCCCCTCCACATCCACAGACCAAGATCCGACTACTAGATGTAGGAATATCGATGTCAATAATCAGACACATTTGGATTTACAAGTAAATACAGAGAAGCTGGATGGTAGGATTGAATCAAAATGGGTTCCAACTAGCACGACTCTGTTATGTCAAGAGACGATCTCCACTGATTCGTCCTTGAAGGCTAGTGTGCCTGAACAGGGACCATGCAAAGAGTCTAAATCTCCTGAAGCCATGGGAAAAAGTGCAAGCAGCAGTGTTATGGAAACAAAAATTGATTCTGATACTTCTGTCAAAGAAGAGAAGACGTTGTCTGTGATTCCTTCTGAAAAAGGTGCTGCAAGCAATATTACTAAGGATAAAATTTCTGAGAAAATAAACAGTGATGAAGACCAGCAAAAGCCTAAGGAGAAACAAAAAGAGTATCGTCACTACAGTATTGATTTGGAGGCAAATATTGACATTGAAGAAACAGGTGATGCAAGCGATTTGGGTAAGGAGAAAAACTCAATGACAAATATTGGTTATGAAGATCAGAAAGGGCCTATGAGGAAACAGAAAGATAATCGTTATATTGACTTAGAGGTAGCACTTGAAGATGAAGAAACAGGTCTTGTAAGCAATATACGCGGGGATAAAGTTTTAGAAAAAATGGATGTTGAGGAAGATTGGCGATGGTCTAAGAGGAAACGAAAAGATGATCACTATATCGACTTGGAGGCAACTTTTCAGGGAGACCCTAGCGCAGAAGAGATTAACTGTCAACTACCTAATGATAAAGTTAAACATATAGATCTTTCTGACACAATTATGCAGGGTTCTGCTGTCAGTTGTCAGAAAATGCCTTGGAGTCAGGGAAATGTCAAGTTAGAAAACACAGAAAGTTCTGGCAAGAAGCTTAAGACTGGTTTCGGTGGGATCTATGGTTCTGGAGGTAGAGACTCTTTTAATGACAGTTTTACATCTCTTGGAAATGATCTTGGTTCCTGTTCTTCAGTTGAGGACAAAGGATGTGAGGAAGCTTGTGATGAGAAAATTATCCGGGAGGACCTGGGAACGATGGAAAGGACCTTCTTTCCAGTGGGCACACACAATATTAGCAACTCACTGTCTGTGCTGAATAGCTTGTCAACCAAAGGGGTTGGTGAATACGATAAAGGATTTCAGGATGTGATTCCTAATCTAGAGCTTGCCTTAGGGGGCAAATCGAAAGCACTGCCGGCACCAGCTGCGCCCAAGGGTATGTTACCTTTCTTAGTCGGACCAGTAGACAGGCAAAATAACCGCCCAGATAGCTTGGGAGATGGGCAGGAGGATGATGGTGTTGCTGCATCTCTTTCCCTCTCTCTGTCCTTTCCATCTTCAAACAAGGAACACAAAAAACCTGCAGAGCTTTTACCTGACGGCCAGCGTATGGACAACTCGTTTTTCCTTTTTGGGAGAAAATGA 4461 0.4127 MTQNTDMRLESGTCNVCSAPCSSCMHLNHALMGSKAEEFSDENCRIGAAIDQYSMDEDKACSLRSRACESSQQTVSEASNMQSVNSSQDALSENAKSRQIILNKYQDSKHLEGHDDNTSCISRSSDANLVNVSHQRNEERITMHEERDSCSLVSEKFSECTIENFSSSCTKEREPVVSGEKCTTVKDGLIEGTSNISRKVCPKLEADTDVCEANNEDPKYSVQDGQCEKAAELVKSPVKRETQSEDESDESDVVEHDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMREMLEKVPEGDWLCEECKDAEENENKKPDVEDKKIVEVSSTSQVTGKRLSDNIEVAPAAKRQALESSTGSPKTSSPKRLVPLSRESSFKSLNKSKVKPGLLIPSRNNSGGSDIEIARSPSTGPRGQTSKGMLMKSNSFSNVNSKPRVKLVDEVVPSKPKGVNEHASKNMEMPARTTVKSTLFKSPSLGRTNATESKVKMLSPKSAAVQDLKGSRHLKESGAIDRKFPSRIDRPVVSSVVSTAKGDQRLTPRAESSKPSTMNNNRELKVNQDGKANALSRSMSNINRKSLEPQIISERTSIRIDEAQQDVLPRARETANQIEKSRDSSSDRLRPAVPTSKPPFCQKCKEFGHAMECCSVGTTQESGAEISVTTSSSSKDEMHKGNILKAAIQAALLRRPEIYKKKEVSNQTDEVSTSGTDLNCEVTSNDPVLVSSTLKNSISAEETPEQQEILESSTSDSSKSSSANDFKQLKSCLTDSRSQPGKSASNCLAAGKPVVKDMSDKAVTLSIVPSKMLAFPEYEYIWQGAFEVHRNGKPPDLYTGLQAHLSSCASPKVLGAVNKFLPRVSFNEASRLSMWPSQFDHGGVTEDNIALYFFASDVESYERHYKGLLDRMIRNDLALKGNFEDVELLIFPSNQLPENSQRWNMLFFLWGIFRGRKMNHSDSTKKICIPSLNVMPAEEKSSTVVLTVPEIHCLAKCKDEETMDRHRSCNALVPSTSTDQDPTTRCRNIDVNNQTHLDLQVNTEKLDGRIESKWVPTSTTLLCQETISTDSSLKASVPEQGPCKESKSPEAMGKSASSSVMETKIDSDTSVKEEKTLSVIPSEKGAASNITKDKISEKINSDEDQQKPKEKQKEYRHYSIDLEANIDIEETGDASDLGKEKNSMTNIGYEDQKGPMRKQKDNRYIDLEVALEDEETGLVSNIRGDKVLEKMDVEEDWRWSKRKRKDDHYIDLEATFQGDPSAEEINCQLPNDKVKHIDLSDTIMQGSAVSCQKMPWSQGNVKLENTESSGKKLKTGFGGIYGSGGRDSFNDSFTSLGNDLGSCSSVEDKGCEEACDEKIIREDLGTMERTFFPVGTHNISNSLSVLNSLSTKGVGEYDKGFQDVIPNLELALGGKSKALPAPAAPKGMLPFLVGPVDRQNNRPDSLGDGQEDDGVAASLSLSLSFPSSNKEHKKPAELLPDGQRMDNSFFLFGRK 1486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00118 1486 MobiDBLite consensus disorder prediction 1061 1145 - -
Vian10g00118 1486 MobiDBLite consensus disorder prediction 594 626 - -
Vian10g00118 1486 MobiDBLite consensus disorder prediction 699 714 - -
Vian10g00118 1486 MobiDBLite consensus disorder prediction 393 418 - -
Vian10g00118 1486 MobiDBLite consensus disorder prediction 1421 1474 - -
Vian10g00118 1486 MobiDBLite consensus disorder prediction 727 754 - -
Vian10g00118 1486 MobiDBLite consensus disorder prediction 1165 1189 - -
Vian10g00118 1486 MobiDBLite consensus disorder prediction 310 325 - -
Vian10g00118 1486 ProSiteProfiles Zinc finger PHD-type profile. 258 309 IPR019787 -
Vian10g00118 1486 SUPERFAMILY FYVE/PHD zinc finger 247 309 IPR011011 -
Vian10g00118 1486 MobiDBLite consensus disorder prediction 528 553 - -
Vian10g00118 1486 MobiDBLite consensus disorder prediction 310 418 - -
Vian10g00118 1486 PANTHER - 258 976 - -
Vian10g00118 1486 SMART PHD_3 260 307 IPR001965 -
Vian10g00118 1486 MobiDBLite consensus disorder prediction 467 487 - -
Vian10g00118 1486 MobiDBLite consensus disorder prediction 694 714 - -
Vian10g00118 1486 MobiDBLite consensus disorder prediction 499 519 - -
Vian10g00118 1486 MobiDBLite consensus disorder prediction 1082 1096 - -
Vian10g00118 1486 MobiDBLite consensus disorder prediction 594 618 - -
Vian10g00118 1486 MobiDBLite consensus disorder prediction 352 382 - -
Vian10g00118 1486 MobiDBLite consensus disorder prediction 1126 1145 - -
Vian10g00118 1486 MobiDBLite consensus disorder prediction 467 553 - -
Vian10g00118 1486 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 196 322 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00118 Vian-Chr10 988732 995949 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00118 - - vun:114172977 2686.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g01748 5 39777613 39785928 Vian10g00118 10 988732 995949 ECH
Vian10g00118 10 988732 995949 Vian10g00118 10 988732 995949 ECH