Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00095 ATGGAGAAATCAGAAGAAAAAGAAGAAAGTGTCGATTTGAGTCGAATATCTCTTCGACTCTTTAAGTCCGCTGACCTGGATGATGTCTTGGTGTGGACCTCCGATGAAAAGATGGCCACTTTCTGCTCTTGGGATCCTAAGAGTGGCGAAGATAAGGGCAACGATCTCATCAATAACATAGACCCCGAGTTGCCGTGGCGACGCAGAGCAATATGCCTGAACGACCGTGCTATTGGGTTTGTTTGTCTTTACCCGATTTCAGCTGATGATCAAAGCAGGAACAGATCCTTGGAACTTGGGTATGTTATTGGTTCGAAATACTGGGGTAAAGGGATTGCCACGTTGGTTGTGAAAAAAGTGGTTAAGGAGGCTTTCACTGAGCAGTGGTTGGCAGACTTGGAGAGGATTGAAGCTCTTGTTGATGTGATGAATGTTGGGTCTCAGAGAGTGCTGGAAAAAGCTGGTTTTCAGAGGGAGGGAATTCTTAGGAAGTATATGTTCCACAAAGGAAAATCCATAGATATGGTGATGTTCAGTGTTTTCTCTACCGATCCTCACCTTCATTCCTCTATCTAA 576 0.4462 MEKSEEKEESVDLSRISLRLFKSADLDDVLVWTSDEKMATFCSWDPKSGEDKGNDLINNIDPELPWRRRAICLNDRAIGFVCLYPISADDQSRNRSLELGYVIGSKYWGKGIATLVVKKVVKEAFTEQWLADLERIEALVDVMNVGSQRVLEKAGFQREGILRKYMFHKGKSIDMVMFSVFSTDPHLHSSI 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00095 191 Gene3D - 8 188 - -
Vian10g00095 191 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 15 180 IPR016181 -
Vian10g00095 191 CDD NAT_SF 70 125 - -
Vian10g00095 191 Pfam Acetyltransferase (GNAT) domain 15 157 IPR000182 GO:0016747
Vian10g00095 191 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 29 180 IPR000182 GO:0016747
Vian10g00095 191 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 4 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00095 Vian-Chr10 836738 837313 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vian10g00095 Acetyltransf_3 3.1e-24 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00095 - - pvu:PHAVU_002G044100g 241.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00095 10 836738 837313 Vian10g00095 10 836738 837313 ECH