Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00086 ATGGTTGCCCTAGTAAAGAGATGCATCAACATATTATTACCAATCTGTGTAAAGATGGATTTGGATTTTGTAAGCTGTGCCCTGCTAGTGCTGTTGGCATGCACCTCCATCCATGTTACATTTTCATTCCTAGGAAGATTCAGAAAACCACACCACAAACTTCCTCCAGGACCCTATCCTCTTCCCATCATAGGAAACCTTCTTCAACTGGGTAACAAGCCCCACCAATCACTGGCCAAGCTTTCCAGCATACATGGCCCTCTGATGAGCCTAAAGCTGGGCCAAATAACCACCGTTGTGGTGTCTTCAGCTGAGATGGCCAAAGAGGTGCTCTTAACCAATGACCACCTTCTGTCAAACCGAACCATTCCCCAATCTGTCTGTGTTCTGAACCACGAAAACTATAGCCTTGCCTTCATTCCCGTTTCCCCTCTTTGGCGCGACTTGAGGAAAATATGCAATGGCCAGTTGTTTGCACGCAACTCTCTCGATGCTAGCCAAGATGTTAGGCGTAGCAAAGTGCAACAACTCCTATCCGAAATCCACCGATGCTGCCAAACCGGTGAAGCAGTGGATATTGGAACAGCGATCTTCAAGACCACCATCAACTTATTATCAAACACCATTTTCTCCATGGATTTGGTTCAATCTTCTGGCAAAGCCGGAGAGTTCAAGGAACTGGTCACCAATATCACCAAACTGGTTGGAACACCAAACCTGGCTGACTATTTTCCTGTCTTGAAGATGATTGATCCACAAGGCATAAAAAAACGTCAGGCTAAGAATGTCAAGAAGGTGTTGGACATTTTTTCCCACTTGGTTGACCGACGGTTGAAGCAAAGAGAAGGTACACACGTTGACGTGCAGAACGACATGTTAGACTCTCTTCTCAACATCTCTCGGGAGAAGAAGATGATGGACAAAACAATGATTCAACATTTGTCACATGATTTGTTTGTTGCGGGAACTGATACGACGACGTCTACATTGGAATGGGCGATGAGTGAGTTAGTACGCAATCCAGAGATTATGTCAAAGGCAACAGAAGAGTTGGAGTTAACCATTGGTAGAGGTAACCCTGTGAAGGAATCAGACATTGCAAGACTTCCGTATTTAGAAGCTATAATAAGAGAGACACTTCGGTTGCATCCACCAGTTCCATTTTTACTGCCTCGAAAAGCTGAGACAGATGTAAACGTATGTGGCTACACTATCCCAAAGGATGCACAGGTGCTGGTGAATGTGTGGACTATTGGAAAGGATTCGAGCATTTGGGAGAATCCAAATTCGTTTTGTCCGGAGAGGTTTCTGGAGTCAGACATTGATGTTAAAGGGAGGAATTTTGAACTGACACCCTTTGGGGGTGGGAGGCGAATATGCCCTGGCATGCTGTTGGCTACGAGGATGTTGTTCCTGATGTTGGGTTCCTTGATTAACTCCTTTCGGTGGAAACTTGAAGATGGCTTCGAACCAGAAGATATGAACATGGATGAGAAATTTGGGATCACCTTACAGAAGGCTCAACCATTACGAGTTGTTCCTGTCAAAAAATAA 1554 0.4492 MVALVKRCINILLPICVKMDLDFVSCALLVLLACTSIHVTFSFLGRFRKPHHKLPPGPYPLPIIGNLLQLGNKPHQSLAKLSSIHGPLMSLKLGQITTVVVSSAEMAKEVLLTNDHLLSNRTIPQSVCVLNHENYSLAFIPVSPLWRDLRKICNGQLFARNSLDASQDVRRSKVQQLLSEIHRCCQTGEAVDIGTAIFKTTINLLSNTIFSMDLVQSSGKAGEFKELVTNITKLVGTPNLADYFPVLKMIDPQGIKKRQAKNVKKVLDIFSHLVDRRLKQREGTHVDVQNDMLDSLLNISREKKMMDKTMIQHLSHDLFVAGTDTTTSTLEWAMSELVRNPEIMSKATEELELTIGRGNPVKESDIARLPYLEAIIRETLRLHPPVPFLLPRKAETDVNVCGYTIPKDAQVLVNVWTIGKDSSIWENPNSFCPERFLESDIDVKGRNFELTPFGGGRRICPGMLLATRMLFLMLGSLINSFRWKLEDGFEPEDMNMDEKFGITLQKAQPLRVVPVKK 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00086 517 SUPERFAMILY Cytochrome P450 55 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g00086 517 PRINTS E-class P450 group I signature 310 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g00086 517 PRINTS E-class P450 group I signature 106 127 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g00086 517 PRINTS E-class P450 group I signature 450 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g00086 517 PRINTS E-class P450 group I signature 373 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g00086 517 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g00086 517 PRINTS E-class P450 group I signature 460 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g00086 517 PRINTS E-class P450 group I signature 82 101 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g00086 517 PRINTS E-class P450 group I signature 414 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g00086 517 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g00086 517 PRINTS P450 superfamily signature 451 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g00086 517 PRINTS P450 superfamily signature 460 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g00086 517 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g00086 517 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 34 - -
Vian10g00086 517 CDD CYP76-like 82 514 - -
Vian10g00086 517 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 453 462 IPR017972 GO:0005506|GO:0016705
Vian10g00086 517 Pfam Cytochrome P450 55 503 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g00086 517 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 31 516 - -
Vian10g00086 517 Gene3D Cytochrome P450 45 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g00086 517 FunFam Cytochrome P450 76C4 46 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00086 Vian-Chr10 773648 775276 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g00086 21 517 Cytochrome P450 AT2G45550 46.548 2.08e-158 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00086 - K23810 gmx:100805772 729.554