Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00070 ATGGGTTCTGAAACTTTTATTGAAGTGATATTAGCAATCCTTTTACCTCCAGTTGGTGTTTTCCTCCGTTATGGCTGTGGTATTGAATTTTGGATAGATCTGCTGCTGACTCTGCTCGGATACATTCCTGGGATCATATATGCCATATATGTACTGGTTGCATGA 165 0.4 MGSETFIEVILAILLPPVGVFLRYGCGIEFWIDLLLTLLGYIPGIIYAIYVLVA 54
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00070 54 Pfam Proteolipid membrane potential modulator 6 53 IPR000612 GO:0016020
Vian10g00070 54 PANTHER HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED 2 53 IPR000612 GO:0016020
Vian10g00070 54 ProSitePatterns Uncharacterized protein family UPF0057 signature. 10 25 IPR000612 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00070 Vian-Chr10 570951 571319 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g00070 1 54 RCI2 Gene Family AT2G38905 88.889 1.22e-28 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00070 - - nnu:104594760 108.997