Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00066 ATGTTCCACTACTTAAGGAAATTTGACACCTCTCTTCTCTGCATCTCTCTGTTTTTCCTGAACTTCTCTCTGTTTTTTCTGAACTTTTCTGTTTTTGCTTCAATGGCGAAGGAGGAAAAGGAGATAGTGATGGAGCTTCTCCCTCTCATTCGAGTGTACAAAGATGGCACGGTGGATCGTCTTCTGAGCTCTCCAAACGTCCCAGCCTCCCTCGAAGACCCTGAAACTGGAGTCTCATCAAAAGACATAGTAATAGCAGACAACCCTTTGGTCTCTGCTCGCGTTTTCCTTCCCAAAAACCACAACAATCCCTCCCACAAACTTCCCATCTTTGTCTACTTCCACGGCGGCGCCTTCTGCGTTGAATCGGCTTTCTCCTTTTTCGTCCATCGCTATCTCAACATCTTAGTCTCCCAAGCCAACGTAATCGCCATCTCCGTTGACTTCAGACTCCTGCCGCACCACCCTCTTCCTGCAGCCTACCAAGATGGCTGGACCACTCTCCAGTGGATCGCTTCCCACGCCACCAATACCGCCGCCAACCCCGAGCCATGGGTACTCCACTACGCCGATTTCAACAAACTCTACGTAGGAGGCGAAACCAGCGGTGCTAACATCGCACACAACTTGCTTCTTCGTGCAGGGGAGGAGTCTCTGCATGGGGATCTCAAGATATTCGGTGCAGTGCTGAGCTCTCCCTTTTTCTGGGGCTCAAAGCCAATTGGGTCGGAGCCTGTCGAAGGGCACGAGCAGAGTTTGGCCATGAAAGTTTGGAGCTTGGCGTGCCCTGATGCTCCTGCTGGAATCGATAATCCCTGGATCAACCCTTGTGTCACTGGGGCACCCTCTTTGGCCACACTTGCGTGTTCTAAGATTCTGATCACCATCACCGGAAAAGACGAGTTCAGAGACAGAAATATTTTGTACCACGACACCATAAAGGAAAGTGGATGGCAGGGAGAAGTTGAATTGTTTGATGCTGGCGATGAAGAACATGCTTTCCAACTCTTCAAGCCTGAAACTGATAGAGCTAAAGCCATGATCAAACACTTGGCTTCGTTTCTGCTCTGA 1071 0.4995 MFHYLRKFDTSLLCISLFFLNFSLFFLNFSVFASMAKEEKEIVMELLPLIRVYKDGTVDRLLSSPNVPASLEDPETGVSSKDIVIADNPLVSARVFLPKNHNNPSHKLPIFVYFHGGAFCVESAFSFFVHRYLNILVSQANVIAISVDFRLLPHHPLPAAYQDGWTTLQWIASHATNTAANPEPWVLHYADFNKLYVGGETSGANIAHNLLLRAGEESLHGDLKIFGAVLSSPFFWGSKPIGSEPVEGHEQSLAMKVWSLACPDAPAGIDNPWINPCVTGAPSLATLACSKILITITGKDEFRDRNILYHDTIKESGWQGEVELFDAGDEEHAFQLFKPETDRAKAMIKHLASFLL 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00066 356 SUPERFAMILY alpha/beta-Hydrolases 37 355 IPR029058 -
Vian10g00066 356 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 111 127 IPR002168 GO:0016787
Vian10g00066 356 Gene3D alpha/beta hydrolase 31 356 IPR029058 -
Vian10g00066 356 FunFam Probable carboxylesterase 12 49 356 - -
Vian10g00066 356 Pfam alpha/beta hydrolase fold 111 335 IPR013094 GO:0016787
Vian10g00066 356 PANTHER ARYLACETAMIDE DEACETYLASE 46 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00066 Vian-Chr10 534611 535681 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g00066 39 355 Carbohydrate Esterase AT1G19190 36.562 2.91e-73 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00066 - K13258 gmx:547489 546.199