Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00046 ATGGCGAACACATTATCGCCATATCTATCACCGTCGTTATCAGTAGCAGCGATAGTAGTATTGTCGGTTTCATGTGGAATATTAATTCAGGAATGCGAGGGCCAGGACCAGCAAGCCAAGGCTTTGCCTCCAGCAGGGGAAACTTGTAACGGGATTTTCATTTCCTATGACTTTCTCAAACGAACCAAAGAATACCCTCACGTGAAGAATGTGACGGCGCAGTCCTGGGCCTTCAGTTCCACCGCATCAGTTCTCAACACAGGTAAAGAAGTGTTTAAGGCATGGAAGCTGTTCATAGAGTTTCAACACGACGAGATTCTAGTCTCCGTCGGCGGAGGCAATATAGAAGAGGCAACCGAGTTCCCCGCTTCGGTAGGAAATGGCACTACCTTCGTCGGAGCTTCTCAGCCAGACTTGGATAGCGCAATCAACACAGCTCAAGATTTAAGCCAGATCCAAGCCGTCATCGACCTTACCGGTACCCAGTTTGGAGTAAAGCCCCCTACGGTTCCTATGCCAAAAACCATCAAGTTGGTAAACGATGGTTACAAATGCCCCAAACCAACTACCCACAAAAGTTCCATGTATGCATGCTGCAAAAAGGACCTTAAAGCCAAGACTACAGTTGCCAAGAAGACAAAATTCTTGGCACGGCAAAAAGGGGATCTTCTGATATCCTATGACGTTACTCAAGTGTATGACGATAATTATTTGGTTCAGGTGTTGATGGAGAACGAACACTTTTTGGGACGGTTGGATCATTGGAACTTGACGTGGGAGTGGACAAGAGGGGAATTTATATACTCCATGAAAGGTGCCTTCACACGTGAGATAGAGTCCCTAGGTTGCATCAATGGCGAGGCAGGAAAGTATTACGCGGGATTGGATTTCTCTAAAGTGCTTAACTGTCAGAAGAATCCTATAGTGAGTGATTTGCCTTCAGAGAAATATAACGACAGTGAACTTGGAAAGATACCTAACTGTTGCAAAGACGGAAATCTTTTACCCATCATTATGGACCCCAGCAAATCCAAGTCTGCTTTTACGATGCAAGTGTACAAAATTCCACCTGATTTAAACAAAACGGCAATTTACCCTCCTGAGAAATGGCAAATTACGGGCATTCTGAACCCACATTACAAATGTGGGTTACCCAGAAGAGTGGAGCCTGCTCGATTTCCAGACCCCAGGGGACTCGAAGCAACGGTTATTGCCATTTCAAGTTGGCAAATAGTCTGCAATATCACTAAGCCAACCAAAAGGAGCACTCGCTGTTGTGTTTCTTTCTCCTCTTATTACAATGACTCCGTAGTCCCTTGCAACACCTGTGCCTGTGGCTGTGATTCTGCAAAGACCAAAAAATGCAATCCCAATTCTCCGGCAATGCTTCTTCCTGCAGAAGCTCTTCTTGTACCCTTTGAAAACAGGTCGGCAAAGACAGTTGCTTGGGCCAAAATGAAGCATTTTACGATTCCCAAAAGATTACCCTGTGCTGACAACTGCGAAGTCAGCATAAACTGGCATGTGGTTTCCGACTACAAAGGTGGGTGGAGTGCTCGAATCACTATGTTCAACTGGATGACTACCCAGTTTGAGAATTGGTTCACCGCCCTCCAATTCAAGAAGACTCCTCGCGGCTACCAAGCAGCATATTCTTTTAATGCAACGACCATTCCAAAGCTCAACCATACTATTTTCTTGCAAGGATTTATCGGAGCAAACTATCTTATAGCTTTGGACAATAAATCAAACCCACATGTTCCCGGAAAACAACAATCCATTATTTCCTTCACCAAGAAGTATTCACCAAATATCAAAATTGCAAAAGGAGATGGGTTCCCTTCCAAGGTCTTTTTCAACGGCGAAGAGTGTTCTCTTCCTACCAGATTCCCTGTCAAAAGTGGAAACCAACCTAATGTTGTTGTAGATTTAGCATACCAACTCTTGTTTTTCGCTTTGGCTTTTACAATCACTCGAGTGCTGTAA 1986 0.4456 MANTLSPYLSPSLSVAAIVVLSVSCGILIQECEGQDQQAKALPPAGETCNGIFISYDFLKRTKEYPHVKNVTAQSWAFSSTASVLNTGKEVFKAWKLFIEFQHDEILVSVGGGNIEEATEFPASVGNGTTFVGASQPDLDSAINTAQDLSQIQAVIDLTGTQFGVKPPTVPMPKTIKLVNDGYKCPKPTTHKSSMYACCKKDLKAKTTVAKKTKFLARQKGDLLISYDVTQVYDDNYLVQVLMENEHFLGRLDHWNLTWEWTRGEFIYSMKGAFTREIESLGCINGEAGKYYAGLDFSKVLNCQKNPIVSDLPSEKYNDSELGKIPNCCKDGNLLPIIMDPSKSKSAFTMQVYKIPPDLNKTAIYPPEKWQITGILNPHYKCGLPRRVEPARFPDPRGLEATVIAISSWQIVCNITKPTKRSTRCCVSFSSYYNDSVVPCNTCACGCDSAKTKKCNPNSPAMLLPAEALLVPFENRSAKTVAWAKMKHFTIPKRLPCADNCEVSINWHVVSDYKGGWSARITMFNWMTTQFENWFTALQFKKTPRGYQAAYSFNATTIPKLNHTIFLQGFIGANYLIALDNKSNPHVPGKQQSIISFTKKYSPNIKIAKGDGFPSKVFFNGEECSLPTRFPVKSGNQPNVVVDLAYQLLFFALAFTITRVL 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00046 661 PANTHER COBRA-LIKE PROTEIN 7 18 657 - -
Vian10g00046 661 Pfam COBRA-like protein 237 416 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00046 Vian-Chr10 327746 329895 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g00046 43 646 COBRA Gene Family AT3G20580 55.829 0.0 717
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00046 - - gmx:100799716 1008.82