Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00044 ATGCTGATACTTCAAGAGAGTTGCACTGATTCTACTGGCTCGTATGTAGTTTATGCTCCTGTGGATATTGTAGCTATGAATGTAGTATTGGGTGGAGGGGATCCAGATTATGTTGCCCTGCTTCCCTCAGGCTTTGCTATTCTTCCTGATGGGCCTGGAATAAATGGTGGGTCAATACTTGATGTAGGATCAGGAGGTTCTCTACTCACAGTTGCCTTCCAGATCTTGGTTGATTCAGCTCCAACAGCAAAACTATCTTTGGGTTCAGTTGCTACGGTTAACAGTCTAATTAAGTGCACTGTTGAAAGGATCAAGGTCGCAGTGATACGTGACAACACCTAA 342 0.4415 MLILQESCTDSTGSYVVYAPVDIVAMNVVLGGGDPDYVALLPSGFAILPDGPGINGGSILDVGSGGSLLTVAFQILVDSAPTAKLSLGSVATVNSLIKCTVERIKVAVIRDNT 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00044 113 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 1 108 IPR042160 -
Vian10g00044 113 SUPERFAMILY Bet v1-like 1 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00044 Vian-Chr10 315600 315941 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g00044 1 111 Homeobox Transcription Factor Family AT4G04890 78.512 1.18e-52 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00044 K09338 - gmx:100815499 206.068