Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00035 ATGAGGGGCGGAGAGGAGAGACAAACGGCGACCGGGATTCGGAAGAAGGGAAGCGGAGTGAGGCAATGGCTGATGCTCGACGGGAAAGGGGAGACGGAGGTGGTGGAGGCCGGGAAGCACGCCATCATGAGGCGCACCGGCCTCCCCGCCCGTGACCTCCGCATATTGGACCCTCTCCTCTCCTACCCTTCCACCCTTCTTGGCCGTGAGAGGGCCATCGTCATCAACTTGGAGCACATCAAGGCCATCATCACCGCCCACGAGGTCCTCCTCCTCAACTCACGTGACCCCTCCGTCACCCCCTTCGTCCAAGAGCTCCAGGCCAGGATCCTCCGCCACCACCAGGCCTTCTCTTCCAAACATCACGACCACCACACCGACTCCGACCCCGACCACGACCACGACCCCGATGCCATCAAGATTCTCCCTTTCGAATTCGTGGCCCTGGAGGCCTGCCTTGAAGCCGCCTGTAGCGTATTGGAGAACGAGGCAAAGACGTTGGAGCAGGAGGCTCATCCCGCCTTGGACAAGCTCACATCCAAGATCAGTACTCTCAATTTGGAACGCGTTCGTCAAATTAAGAGCCGATTGGTCGCCATCACTGGCCGTGTTCAGAAGGTGAGGGATGAATTGGAGCACTTGCTGGACGACGACGATGATATGGCTGAGATGTATCTGACGGATAAGACCGCTACAGAAATATCCTTTGAGGCTGGAGAACCCCCTGTGGGCTTTGAGGATCAACACAATGCCTACAATGTTCTTGGTAGGGACAGCCATGGAACCCGTGGTAGCACTTACAGTGCCGTCACCAAGCAGCTTGATGTCGAGGAGCTTGAAATGCTTTTGGAGGCTTACTTTGTGCAGATCGATGGCACCCTGAACAAGCTCTCAACGCTGAGGGAATATGTTGATGACACGGAGGATTACATCAACATCATGCTGGATGACAAACAGAACCATCTCCTCCAAATGGGAGTCATGTTGACCACAGCAACTCTGGTAGTGAGTGCCTTTGTTGTTGTGGCCGGAGTTTTTGGCATGAATATTCACATTGAGCTATTTGATCCAGATAAAGCTGGGATGACAGAGTTCCTCTGGACTGTTGGTGGTAGCACTGCAGGGACCATATTCTTGTATGTAGTTGCCATTGCCTGGTGTGTATGGTTGAAAAACAGAGATGAAAAGAAAAAAAAACGGAAGGGAGAAACTAATAAATGTGATAAAAATGAACAGAAGAATGACAAAAAGTTACCAGTTTTTGCATTTGTCATGCAGAGCGTTGTCCTGAGAAATGGGAACAGCCAAAATAGATTGGAAATGGAGAGGGAAATAGAAGATGAAGCATGA 1350 0.5178 MRGGEERQTATGIRKKGSGVRQWLMLDGKGETEVVEAGKHAIMRRTGLPARDLRILDPLLSYPSTLLGRERAIVINLEHIKAIITAHEVLLLNSRDPSVTPFVQELQARILRHHQAFSSKHHDHHTDSDPDHDHDPDAIKILPFEFVALEACLEAACSVLENEAKTLEQEAHPALDKLTSKISTLNLERVRQIKSRLVAITGRVQKVRDELEHLLDDDDDMAEMYLTDKTATEISFEAGEPPVGFEDQHNAYNVLGRDSHGTRGSTYSAVTKQLDVEELEMLLEAYFVQIDGTLNKLSTLREYVDDTEDYINIMLDDKQNHLLQMGVMLTTATLVVSAFVVVAGVFGMNIHIELFDPDKAGMTEFLWTVGGSTAGTIFLYVVAIAWCVWLKNRDEKKKKRKGETNKCDKNEQKNDKKLPVFAFVMQSVVLRNGNSQNRLEMEREIEDEA 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00035 449 CDD Mrs2_Mfm1p-like 23 391 IPR039204 -
Vian10g00035 449 FunFam Magnesium transporter MRS2-E 98 322 - -
Vian10g00035 449 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 10 385 IPR039204 -
Vian10g00035 449 Pfam CorA-like Mg2+ transporter protein 278 383 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Vian10g00035 449 Gene3D - 9 94 - -
Vian10g00035 449 Coils Coil 150 170 - -
Vian10g00035 449 Gene3D Magnesium transport protein CorA, transmembrane region 97 322 - -
Vian10g00035 449 FunFam Magnesium transporter MRS2-1 11 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00035 Vian-Chr10 270186 275044 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g00035 23 389 MRS2 Gene Family AT3G19640 62.587 1.67e-175 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00035 - - gmx:100819578 583.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00035 10 270186 275044 Vian10g00035 10 270186 275044 ECH