Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g04511 ATGGAGAAAAGGTATGTTCCAGCCACATGCCCACTTGATCTTGCTCCTGACCTTCATCATGATGCCCATGCTCGTTGTCATGATCGAAATAGTGATCAAGGTGTGTGTATGATTACCAAGCAGAGGAGGCGAGGCGGTGATATCACCGGCGATTGGTGCACTGAGGAGTTCTGTTTGAGGAAGATTAAGAATGATGAACTCAAGGCTGAGGCTAAGGCCAAGGGTGAAGTCATAAGTACCAAGTGCAAGCCAGAAGGACCCAAACCTGGTTTCATGGTTGAAGGAGCTACATTGGAAACAGTTACTCCAATTCCATATGATGTTGTTAATGATCTCAAGGGAGGATACTAG 351 0.4615 MEKRYVPATCPLDLAPDLHHDAHARCHDRNSDQGVCMITKQRRRGGDITGDWCTEEFCLRKIKNDELKAEAKAKGEVISTKCKPEGPKPGFMVEGATLETVTPIPYDVVNDLKGGY 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g04511 116 PANTHER 60S RIBOSOMAL PROTEIN L21 44 116 IPR001147 GO:0003735|GO:0005840|GO:0006412
Tsu08g04511 116 Gene3D - 52 108 - -
Tsu08g04511 116 PANTHER BNACNNG19840D PROTEIN 44 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g04511 Tsu-Chr8 62800441 62803570 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g04511 53 116 Cytoplasmic Ribosomal Protein Gene Family AT1G09690 84.375 3.02e-33 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g04511 K02889 - tcc:18597611 124.02