Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g04509 ATGGGCTCACTTCCTAAGAGCGCATCATACTTTCCAGCCTATCATCATCTCAGCATGTTGCAACAAGTCATTGATGGTGACGACGTAGAAAACCGTTTAGTTAAAAGTTATAAGAGGAGTTTTAATGGTTTTGCTGCCATACTCAATGatcaacaaagagaaaaacttCTTGGCATGAGAGGTGTGCTAACTGTGTTTCCAAGCCAAATGTTTCACCTACAAACCACAAGATCATGGGACTTCCTTGGATTTCCTCAATCAATCAAAAGAGATCAAACTGTTGAGAGCAATTTGGTGATTGGTGTCATAGACAGCGGAATCTGGCCAGAATCTGAAAGTTTCAATGACAAAGCAAGTGGAAGAGAGGTGAAGGATATAAACTTTTATGGTTTAGCAAAAGGAACGGCAAGAGGTGGAGTTCCATCTTCAAGGATCGCTGTATACAAAATATGCGACGCAAATGGTAATTGTAGTGGAAAGGATATTTTAGCTGCATTTGATGATGCAATTGCAGATGGAGTTGACATTATCACAATCTCAATTGGGAGACAACATGCCATTGATTTTTTGCAAGATCCTCTTGCCATTGGTTCTTTTCATGCCATGGAGAAAGGGATACTCACAGTGCAGGCGGCGGGAAATTATGGTCCAGAACCAAGTAGTATTTCTAGTGTAGCACCTTGGTTATTTAGCGTTGCTGCAACTAGCATAGATCGTCAATTTGTTGATAAGCTCGTTCTTGGAAATGGAAAGACATTTATTGGTAAGTCAATTTATATCGTCCCCACAAATGGCAAAAAATTTCCAATAGCTGTGCGTAATGCTCAAACTTGCCCGGGTGAACATGAATCGCCTGAAAGGTGTGATTGTACAGACAAAAATATGGTGAGTGGTAAGCTTGTTTTGTGTGGTGATCCAGGGAATGAAGAATTTGCTTATGAAAATGGCGCAATTGGTTCAATCATTAATGTTACACGTTCTCAAAATGATGTTTCTGATGTCACTCTAATGCCTTCACTTAATTTGGATACAGAAGATTATGTTCAAGTTCAATCTTATACAAATTCCACTAAATACCCTGTAGCTGAAATTTTGAAGAGTGAGATCTTCCATGACAACAGTGCTCCCAGAATTGTCAGTTTCTCTTCTCGTGGTCCAAATACTTTGGTTCCAGAAATTATGAAGCTAGATATAAGTGCCCCAGGAGTGGATATCTTGGCCGCATACTCACCTCTAGCGCCACCTTCAGATGATGTGGAAGACAACAGAAAGGTCAAATACAACATAGAATCTGGAACCTCCATGGCATGTCCCCACGTTGTTGGAGTTGCTGCATATGTGAAATCATTTCATCCAGATTGGTCACCTGCAGCTATCAAATCTGCCATAATGACTACGGCGAGACCAGTGAATGGTACTTATAATGATATGGCGGACGAGTTTGCTTATGGATCTGGGAATATCAATCCACAACAAGCTGTCGACCCTGGACTTGTTTATGACATCAATAAGCAAGATTATATGCAAATGCTTTGTAATTTTGGTTATGattctaacaaaattaaaatgattagTGGAGATAATTCAAGTTGCCACAGAGCTTCCAATAGATTATTTGCGAAAGATATAAACTATCCAGCTGTGGTGATTCCTGTTGAGTCTCATAAACATTTCAATGTGGAGATTCCTAGAACAGTTACAAATGTTGGCTCTCCCAACTCTAGCTACAGGGCTACTATTATCCCAATTCAAAATATCAAGATTAGTGTGAAACCAAAAGTTCTCTCATTCAAATCGTTAAATGAGAAACACTCATTTGTCGTCACTGTTGTTGGGGTgGAAACTGAGGAAAATATCTTACAGCAACAATCCAAGATGGAGTGGTTAAAACTGGGGAATGGGAATAATAGATACTTCCATGCCTCAATAAAAACCACGACAGCTTCAAAAAGCATAAATGTGTTGCACAAAGATGATGGCACCCGACTCACTAACCAAGATGAAATTGAAGATGAGGTTCCTACTTTATACGATAAACTCATGGGCACAAATGATATTTTCCGTAACAATCTCGTTGAAGAATTGACTGCGGTCTGGCAAGTGAACCAGTCTGTCGTCGAGTAA 2124 0.3917 MGSLPKSASYFPAYHHLSMLQQVIDGDDVENRLVKSYKRSFNGFAAILNDQQREKLLGMRGVLTVFPSQMFHLQTTRSWDFLGFPQSIKRDQTVESNLVIGVIDSGIWPESESFNDKASGREVKDINFYGLAKGTARGGVPSSRIAVYKICDANGNCSGKDILAAFDDAIADGVDIITISIGRQHAIDFLQDPLAIGSFHAMEKGILTVQAAGNYGPEPSSISSVAPWLFSVAATSIDRQFVDKLVLGNGKTFIGKSIYIVPTNGKKFPIAVRNAQTCPGEHESPERCDCTDKNMVSGKLVLCGDPGNEEFAYENGAIGSIINVTRSQNDVSDVTLMPSLNLDTEDYVQVQSYTNSTKYPVAEILKSEIFHDNSAPRIVSFSSRGPNTLVPEIMKLDISAPGVDILAAYSPLAPPSDDVEDNRKVKYNIESGTSMACPHVVGVAAYVKSFHPDWSPAAIKSAIMTTARPVNGTYNDMADEFAYGSGNINPQQAVDPGLVYDINKQDYMQMLCNFGYDSNKIKMISGDNSSCHRASNRLFAKDINYPAVVIPVESHKHFNVEIPRTVTNVGSPNSSYRATIIPIQNIKISVKPKVLSFKSLNEKHSFVVTVVGVETEENILQQQSKMEWLKLGNGNNRYFHASIKTTTASKSINVLHKDDGTRLTNQDEIEDEVPTLYDKLMGTNDIFRNNLVEELTAVWQVNQSVVE 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g04509 707 ProSiteProfiles Serine proteases, subtilase domain profile. 78 494 - -
Tsu08g04509 707 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.3 118 628 - -
Tsu08g04509 707 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.3 1 118 - -
Tsu08g04509 707 Pfam Subtilase family 136 486 IPR000209 GO:0006508|GO:0008236
Tsu08g04509 707 CDD PA_subtilisin_like 245 364 - -
Tsu08g04509 707 Pfam Fibronectin type-III domain 542 628 IPR041469 -
Tsu08g04509 707 SUPERFAMILY Subtilisin-like 81 498 IPR036852 GO:0004252|GO:0006508
Tsu08g04509 707 Pfam Peptidase inhibitor I9 16 73 IPR010259 -
Tsu08g04509 707 ProSitePatterns Serine proteases, subtilase family, serine active site. 432 442 IPR023828 -
Tsu08g04509 707 Gene3D Peptidase S8/S53 domain 118 507 IPR036852 GO:0004252|GO:0006508
Tsu08g04509 707 Gene3D - 238 371 - -
Tsu08g04509 707 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 118 628 IPR045051 -
Tsu08g04509 707 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 118 IPR045051 -
Tsu08g04509 707 Gene3D - 511 641 - -
Tsu08g04509 707 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 74 IPR037045 -
Tsu08g04509 707 PRINTS Subtilisin serine protease family (S8) signature 95 114 IPR015500 -
Tsu08g04509 707 PRINTS Subtilisin serine protease family (S8) signature 431 447 IPR015500 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g04509 Tsu-Chr8 62780195 62784342 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g04509 1 623 Subtilisin-like Serine Gene Family AT3G46840 46.870 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g04509 - - mtr:MTR_1g006990 824.313