Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g04508 ATGCATTGGAGAAGGGAATACTCAACACATGCTGCAGGTAATGATGGTCCTAAACCAAGTAGTGTTGCTAGTGCCGCACCTTGGTTATTTAGTGTTGCTGCAACTAGCATCGATCGTCAATTTATTGACAAGCTTATTCTTGGAAATGGAAAGACTTTAATTGGTAAGTCAGTTAATACCATCCCTTCAAATGGCACAAAATTTCCAATAGCGGTGCGTAATGCTCAAGCTTGCCCGGGAAATGCATCCCCTGAAATGTGTACATGTATAGACACAAAATCTGTGAAGGGTAAACTTGTTTTGTGTGGAGCACTAAACAACTTTGATAGATATGCTTATGCAAACGGTGCAATTGGTTCAATCATTAATGTTACAAACTCACATAATGATATGTCTTTCGTCACTTCGATGCCTTCACTTAACTTGGACACTGAGGACTATGTTCTTGTTCAATCTTACACAAACTCCACTAAATACCCTGTAGCTGAAATTTTGAAGAGCGATATATTTCATGACACCACTGCTCCTAGAATTGTCGGCTTCTCTTCTCGTGGCCCAAATCCTTTGCTTCCAGAAATTATGAAACCGGACATAAGTGCCCCGGGTGTGGATATCTTGGTCTCATATTCACCTATAGCGTCACCCTCACAAGATATAAATGACAAAAGACGGGTAAAATACAACCTATTATCTGGAACCTCTATGGCATGTCCCCATGTTGCTGGAGTTGTTGCATATGTGAAATCATTTCAACCAGATTGGTCACATGCAGCTATCAAATATGCCATAATGCCTACGGCGAGACAGGTGAATGGTACTTATAATGATATGGTGGGCGAGTTTGCTTATGGATTTGGGAATGTCAATCGACAACAAGCTGTTGACCCTGGACTTGTTTATGACATCAATAAGCAAGATTATGTGCAAATGCTTTGTAATTATGGTTATAATGCTGACAAAATTAAACTGATTAGTGGAGATAATTCAAGTTGCCAAGGAGCTTCCAGTAGACCCTTTGTGAAAGATATAAACTATCCTGCACTTGTGATTCCTATTGAGCCTAATAAACTTGTGAATGTCAAGATTAACAGAACAGTTACAAACGTTGGCTCTCCCAACTCAACCTATAGGGCTACCGTTATCCCAATACCAAAAATCAAGATTCGTGTGGAACCAAAACTTCTCTCATTCAAGTCATTAAATGAGAAACAGTCATTTACTGTCACTGTTGTTGGGGGAGAAGAATTAAATGAAACTATGATTTCCTCATCACTTATTTGGTCAGATGGCTCCCACAATGTGAAGAGTCCAATCATTGTGCAATGTCTATCCTAA 1335 0.3955 MHWRREYSTHAAGNDGPKPSSVASAAPWLFSVAATSIDRQFIDKLILGNGKTLIGKSVNTIPSNGTKFPIAVRNAQACPGNASPEMCTCIDTKSVKGKLVLCGALNNFDRYAYANGAIGSIINVTNSHNDMSFVTSMPSLNLDTEDYVLVQSYTNSTKYPVAEILKSDIFHDTTAPRIVGFSSRGPNPLLPEIMKPDISAPGVDILVSYSPIASPSQDINDKRRVKYNLLSGTSMACPHVAGVVAYVKSFQPDWSHAAIKYAIMPTARQVNGTYNDMVGEFAYGFGNVNRQQAVDPGLVYDINKQDYVQMLCNYGYNADKIKLISGDNSSCQGASSRPFVKDINYPALVIPIEPNKLVNVKINRTVTNVGSPNSTYRATVIPIPKIKIRVEPKLLSFKSLNEKQSFTVTVVGGEELNETMISSSLIWSDGSHNVKSPIIVQCLS 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g04508 444 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 9 442 IPR045051 -
Tsu08g04508 444 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.3 9 442 - -
Tsu08g04508 444 MobiDBLite consensus disorder prediction 1 20 - -
Tsu08g04508 444 Pfam Fibronectin type-III domain 342 440 IPR041469 -
Tsu08g04508 444 SUPERFAMILY Subtilisin-like 10 298 IPR036852 GO:0004252|GO:0006508
Tsu08g04508 444 Pfam Subtilase family 11 286 IPR000209 GO:0006508|GO:0008236
Tsu08g04508 444 Gene3D Peptidase S8/S53 domain 8 300 IPR036852 GO:0004252|GO:0006508
Tsu08g04508 444 ProSitePatterns Serine proteases, subtilase family, serine active site. 232 242 IPR023828 -
Tsu08g04508 444 Gene3D - 311 443 - -
Tsu08g04508 444 CDD PA_subtilisin_like 45 164 - -
Tsu08g04508 444 ProSiteProfiles Serine proteases, subtilase domain profile. 1 294 - -
Tsu08g04508 444 Gene3D - 41 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g04508 Tsu-Chr8 62774668 62776002 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g04508 8 444 Subtilisin-like Serine Gene Family AT5G59100 47.865 1.92e-133 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g04508 - - mtr:MTR_1g006990 573.163