Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g04494 atggtcAAGTATAGTGTTGTTTTAGTATTCTTTGTGTGTTTAGCTTTGGCATCAATGATTTCTTTGGTGTGTGATGCCACCAAAAGTGGTGATGAAAGTAGTAAACTTTACATTGTATATTTGGGCTCACTTCCCAAAGTAGCATCATATTCTCCAACCTCTCACCATATTAGCTTGTTGCAACAAGTTGTTGATGGGAGTGACATACAAAAATGTTTAGTTGGAAGTTACAAGAGGAGTTTTAATGGTTTTGCCGCTATACTCAACGATCAACAAAGGAGAAAACTTGCCGACATGAGAGGTGTGGTCTCGGTATTTCCAAGCCAAGAGTACCATCTTAAAACCACGAGGTCGTGGGACTTTCTTGGTTTACCACAATCAATCAAACGAGGCAAAACTATTGAAAGTGATTTGGTGATCGGTGTCATAGATAGTGGAATTTGGCCAGAATCTGAAAGTTTCAACGATAAAGGTCTTGGCGCTATTCCAAAAAAGTGGAGAGGAGTTTGTGCAGGCGGGCGTAACTTCAGTTGCAATAAGAAGATCGTTGGAGCACGATTTTATGGTTTCAATGATGAGAGTGCAAGAGACTTTGAAGGTCACGGAACTCACACATCGTCAACAGCTGGTGGAAGGGAAGTCAAGAGTGTGAGTTTTAATGGCCTTGCAAAAGGCACTGCAAGAGGTGGAGTCCCATCTTCAAGGATTGCTATATACAAAGTCTCCAACAATTATGGTATGATCACTGGTCATGCTGTTTTATCTGCCTTTGATGATGCCATTGCAGACGGAGTTGATGTCATTACCATCTCTATTGGTAGATTAGGAATTATTGACTTTACAAATGACCCTATTTCGATCGGTTCATTTCATGCCATGGAGAAGGGAATACTCACAGTGCAGGCTGCAGGAAATAGTGGTCCTACCCCAAGTAGTGTTTCCTGTTTAGCACCTTGGTTATTAGGTGTTGCTGCCACTACCATAGATCGTCAATTCATCGATAAGCTCGTTCTTGGAAATGGAAAGACATTTATTGGTAGGTCAGTTAATATTTTCCCTTCAAATGGAACTAATTTTCCAATTGCTGTGCGTAATGCTCAAGCTTGCTCTGGTGGAAGACTTGCATCCCCTGAAAATTGTGATTGTATAGACAAAAACATGGTCAAGGGTAAACTTGTTTTATGTGGACAAAATGGGGGTCAACGATTAGCATATGCCAATGGTGCAATTGGTTCAATCATTAATAGCACACGATCTAGTTTTGATCTACCTTCTATCACTGAGAAACCTTCACTTAAGTTGGAAACAAAGGATTTTGTTCATGTTCAATCTTATATAAATTCCACTAAATACCCTGTAGCTAAAATTTTAAAGAGTGAGACATTCCTCCATGACACCAATGCTCCTAGAATTGCTGATTTCTCTTCTCGTGGACCTAATCCTTTAGTTTTAGAAATTATGAAACCAGATGTAAGTGCCCCAAGAGTGACTATTTTGGCTGCATTTCCACCTCAAGAATCACAATTAGATTGTATGATCAAATACAACCTATTATCTGGAACCTCTATGGCATGTCCTCACGTTGCTGGAGTTGTTGCATATGTGAAATCATTTCATCCAGATTGGTCGCCTGCGGCTATCAAATCTGCCATCATGACCACCGCAAAACCAGTGAAAGGTACTGATGATGATTTGGTAGGTGAGTTTGCTTATGGATCTGGGAATATCAATCCACAACAAGCCCTTCATCCTGGACTTGTTTATGACATCACTAAGCAAGATTATGTGCAAATGCTTTGTAATTATGGTTATGACgaaaacaaaattaagcaaATTAGTGGAGATGATTCCAGTTGCCATGGAGCTCCTGAAAGATCCTTATTGAAAGATATAAACTATCCAGCAATGGTGATTCCTGTTAGACCTTATCATAATCATTTCAATGTCAAAATTCATAGAACAGTCACAAATGTTGGTTTTCCAAACTCAACCTACAAGGCTACTCTCATCCATCATAATCCAAAATTCAAGATTATCGTGAAACCGAAATTGCTCTCATTTAGATCATTAAATGAGAAACAATCATTTGTTGTCATTGTTGTTGGAggaacaaaattaaatcaaactgTGTTTTCCTCATCACTTACATGGTCTGATGGTACCCACAATGTCAAGAGTCCCATTGTTGTACATATACTTCCTCAAATATAA 2211 0.3844 MVKYSVVLVFFVCLALASMISLVCDATKSGDESSKLYIVYLGSLPKVASYSPTSHHISLLQQVVDGSDIQKCLVGSYKRSFNGFAAILNDQQRRKLADMRGVVSVFPSQEYHLKTTRSWDFLGLPQSIKRGKTIESDLVIGVIDSGIWPESESFNDKGLGAIPKKWRGVCAGGRNFSCNKKIVGARFYGFNDESARDFEGHGTHTSSTAGGREVKSVSFNGLAKGTARGGVPSSRIAIYKVSNNYGMITGHAVLSAFDDAIADGVDVITISIGRLGIIDFTNDPISIGSFHAMEKGILTVQAAGNSGPTPSSVSCLAPWLLGVAATTIDRQFIDKLVLGNGKTFIGRSVNIFPSNGTNFPIAVRNAQACSGGRLASPENCDCIDKNMVKGKLVLCGQNGGQRLAYANGAIGSIINSTRSSFDLPSITEKPSLKLETKDFVHVQSYINSTKYPVAKILKSETFLHDTNAPRIADFSSRGPNPLVLEIMKPDVSAPRVTILAAFPPQESQLDCMIKYNLLSGTSMACPHVAGVVAYVKSFHPDWSPAAIKSAIMTTAKPVKGTDDDLVGEFAYGSGNINPQQALHPGLVYDITKQDYVQMLCNYGYDENKIKQISGDDSSCHGAPERSLLKDINYPAMVIPVRPYHNHFNVKIHRTVTNVGFPNSTYKATLIHHNPKFKIIVKPKLLSFRSLNEKQSFVVIVVGGTKLNQTVFSSSLTWSDGTHNVKSPIVVHILPQI 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g04494 736 CDD PA_subtilisin_like 336 456 - -
Tsu08g04494 736 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 36 732 IPR045051 -
Tsu08g04494 736 SUPERFAMILY Subtilisin-like 8 640 IPR036852 GO:0004252|GO:0006508
Tsu08g04494 736 Pfam Peptidase inhibitor I9 37 113 IPR010259 -
Tsu08g04494 736 CDD Peptidases_S8_3 111 555 IPR034197 -
Tsu08g04494 736 ProSiteProfiles Serine proteases, subtilase domain profile. 118 582 - -
Tsu08g04494 736 Gene3D - 329 463 - -
Tsu08g04494 736 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.3 36 732 - -
Tsu08g04494 736 Gene3D Peptidase S8/S53 domain 137 595 IPR036852 GO:0004252|GO:0006508
Tsu08g04494 736 Pfam Subtilase family 136 567 IPR000209 GO:0006508|GO:0008236
Tsu08g04494 736 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 114 IPR037045 -
Tsu08g04494 736 Gene3D - 599 733 - -
Tsu08g04494 736 Pfam Fibronectin type-III domain 630 730 IPR041469 -
Tsu08g04494 736 PRINTS Subtilisin serine protease family (S8) signature 519 535 IPR015500 -
Tsu08g04494 736 PRINTS Subtilisin serine protease family (S8) signature 135 154 IPR015500 -
Tsu08g04494 736 PRINTS Subtilisin serine protease family (S8) signature 197 210 IPR015500 -
Tsu08g04494 736 ProSitePatterns Serine proteases, subtilase family, serine active site. 520 530 IPR023828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g04494 Tsu-Chr8 62660599 62664790 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g04494 32 731 Subtilisin-like Serine Gene Family AT5G59120 51.058 0.0 701
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g04494 - - mtr:MTR_1g006990 1038.1