Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g04493 ATGACAAAGTATAATGTTGTTTTATTAATATTCCTTGTGTTTTTAGCTTTGACATCGATAATTTCTTTGGTGTGTGATGCCACTGAAAGCAGTAAACTTTACATTGTATACATGGGTTCACTTCCTAAAGAAGCAACATATTCCCCAACATCTCACCATATTAACTTGTTGCAACAAGTTGTGGATGACAATGACatacaaaattgttttgttcGAAGTTACAAAAGGAGTTTCAATGGTTTTGCCGCTATACTTAACGACCAACAAAGGGAAAAACTTGTCGGCATGAGAGGTGTAGTGTCAGTTTTTCCAAGCCAAGAGTACCACCTTAAAACCACAAGGTCATGGGACTTCCTTGGTTTACCTCAATCAATAGATCGAGACAAAAGTGTTGAAAGTGATTTGGTGATCGGTGTCATAGATACTGGAATTTGGCCAGAATCTGAAAGTTTCAACGATAAAGgTCTTGGTCCAATTCCGAGAAAATGGAAGGGAGTTTGTGCAGGTGGTAGTAACTTTAGTTGCAACAAGAAATTAATCGGAGCACGATTTTACggtggtgaagatgaaggtGCAAGAGATAATACGGGTCATGGAACCCACACAGCATCAACAGCAGGTGGAAGAGAGGTGAAAGGTGTGAGTTTTGAAGGTATTGCAAAAGGCACTGGAAGAGGCGGAGTCCCATCTTCAAGGATTGCTGCATACAAAGTTTGTTTAGAAGGTGGATGTCTTGGAGCTTCTATTTTAGGTGCATTTGATGATGCCATTGCTGATGGAGTTGACGTCATCACCATCTCTATGGGTTTACCAACAGTTGTTGAATTTGTGAATGATCCTGTTGCCATTGGTTCTTTTCATGCCATGGAGAAGGGAATACTCACAACGCATTCTGCAGGAAACTCTGGACCCACCCCAAGTAGTGTTATAAGTGTAGCACCTTGGTTATTTACTGTTGCTGCAACTAGCATTGATCGTCAATTCATTACTAAGCTTATTCTTGGAAATAGAAAGACTTTGATTGGTAAGTCAATTTATACTGGCCCGTCAAATGGAACCAAATTTCCAATAGCAGTGCGTAATGCTAAATCTTGTCCCAATGGAGCAAATGCATCCCCAGAAATGTGTGATTGTTTGGATAAAAGTATGGTGAAGGGAAAACTTGTTTTGTGTGGAGCAGGTGGAGTGCTTACTTCTTCCGATACAGGTATAATTGGTTCGATAATTAATGTTACGGACTCTAGTTTTGATATGTCTGATATCACTTACAAGCCTTCCCTTAACTTGAAAACCAAGGACTTTGTTCAAGTTCAATCTTACACAAATTCTACTAAATACCCTGTTGCTCAAATTTTAAAGAGTGAGATCTTTCACGACACCAATGCCCCCAAagttatatttttctcttctcgTGGCCCAAATCCTTTGGTTTCAGAAATTATGAAACCTGATATAAGTGCTCCAGGAGTGAATATCTTAGCTGCATATGCACCTATAGGGACATCCATGCCTAATACGGATGACAACAGAAAGTTCAAATACAAGATAGAATCTGGAACCTCTATGGCATGTCCCCACGTTGCTGGAGTTGTTGCATATGTAAAATCATTTCATCCAGATTGGTCACCTGCAGCTATCAAATCTGCCATTATGACGACTGCTAAACCTGTGAAAGGTACTTATGCTGATTTGGCAGGTGAATATGCTTATGGATCTGGTAATATCAATCCACAAAAAGCCCTTCATCCTGGACTTGTTTATGACATCACTAAGCAAGATTATGTGCAAATGCTTTGTAATTATGGTTatgatgaaaacaaaattaaacaaattagtGGAGATAATTCTAGTTGCCATGGAGTTCCTGAAAGATCTTTGTTGAAAGATATAAACTATCCTGCAATGGTGATTCCGATTGTGCCTGATAATAACCATTTCCAAGTCAAGATTCAAAGAATAGTCACAAACGTTGGCTTTCCCAACTCAACCTACAAGGCTACACTCATTCATCATAATCCAAAAATCAAGATCATAGTTGAACCAAAACTTCTCAAATTCAAATCGTTACACGAGAAGCAATCATTTGTTGTCACCATTATTGGGAgtgaaaaattaaatcaaacattttCCTCATCACTCATTTGGTTTGATGGCACCCACAATGTCAAAAGTCCTATTATTGTACAGATATTACCTCTATAA 2202 0.3724 MTKYNVVLLIFLVFLALTSIISLVCDATESSKLYIVYMGSLPKEATYSPTSHHINLLQQVVDDNDIQNCFVRSYKRSFNGFAAILNDQQREKLVGMRGVVSVFPSQEYHLKTTRSWDFLGLPQSIDRDKSVESDLVIGVIDTGIWPESESFNDKGLGPIPRKWKGVCAGGSNFSCNKKLIGARFYGGEDEGARDNTGHGTHTASTAGGREVKGVSFEGIAKGTGRGGVPSSRIAAYKVCLEGGCLGASILGAFDDAIADGVDVITISMGLPTVVEFVNDPVAIGSFHAMEKGILTTHSAGNSGPTPSSVISVAPWLFTVAATSIDRQFITKLILGNRKTLIGKSIYTGPSNGTKFPIAVRNAKSCPNGANASPEMCDCLDKSMVKGKLVLCGAGGVLTSSDTGIIGSIINVTDSSFDMSDITYKPSLNLKTKDFVQVQSYTNSTKYPVAQILKSEIFHDTNAPKVIFFSSRGPNPLVSEIMKPDISAPGVNILAAYAPIGTSMPNTDDNRKFKYKIESGTSMACPHVAGVVAYVKSFHPDWSPAAIKSAIMTTAKPVKGTYADLAGEYAYGSGNINPQKALHPGLVYDITKQDYVQMLCNYGYDENKIKQISGDNSSCHGVPERSLLKDINYPAMVIPIVPDNNHFQVKIQRIVTNVGFPNSTYKATLIHHNPKIKIIVEPKLLKFKSLHEKQSFVVTIIGSEKLNQTFSSSLIWFDGTHNVKSPIIVQILPL 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g04493 733 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.3 33 730 - -
Tsu08g04493 733 Gene3D Peptidase S8/S53 domain 134 594 IPR036852 GO:0004252|GO:0006508
Tsu08g04493 733 Gene3D - 325 458 - -
Tsu08g04493 733 SUPERFAMILY Subtilisin-like 110 585 IPR036852 GO:0004252|GO:0006508
Tsu08g04493 733 Gene3D - 598 731 - -
Tsu08g04493 733 CDD PA_subtilisin_like 332 451 - -
Tsu08g04493 733 Pfam Fibronectin type-III domain 629 728 IPR041469 -
Tsu08g04493 733 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 33 730 IPR045051 -
Tsu08g04493 733 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 111 IPR037045 -
Tsu08g04493 733 PRINTS Subtilisin serine protease family (S8) signature 518 534 IPR015500 -
Tsu08g04493 733 PRINTS Subtilisin serine protease family (S8) signature 132 151 IPR015500 -
Tsu08g04493 733 PRINTS Subtilisin serine protease family (S8) signature 194 207 IPR015500 -
Tsu08g04493 733 Pfam Peptidase inhibitor I9 34 110 IPR010259 -
Tsu08g04493 733 Pfam Subtilase family 133 571 IPR000209 GO:0006508|GO:0008236
Tsu08g04493 733 ProSitePatterns Serine proteases, subtilase family, serine active site. 519 529 IPR023828 -
Tsu08g04493 733 CDD Peptidases_S8_3 108 554 IPR034197 -
Tsu08g04493 733 ProSiteProfiles Serine proteases, subtilase domain profile. 115 581 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g04493 Tsu-Chr8 62656757 62659212 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g04493 24 728 Subtilisin-like Serine Gene Family AT5G59120 51.332 0.0 710
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g04493 - - mtr:MTR_1g006990 1031.94