Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g04491 ATGCCATCAGTAACAAAAGAGAAAGTAAATGGAAATTTCAATATGAGTGAAGGAGTTATAATAGTAAGAAATGTTGAGTTTTCTTCGGTATGTGCGAAGGATCAAAATaatctcaaacaaaaaatagagaatGTAACTGGAGAAAGCGAAAAAGAAAAGATTCGTGTTGGGATGGATTCGGTCATTCATAAACTTCCACAAGGTCAAATGATATCAgataaattgaaagaagaaattttgaagaaattgacAGAACCTATTATTATTAGACACAAGAACTCCATAAGAAGAATCATGTCTCTTCAAGAACCACTAGTAAGTTATTGTCAACAACAAGAGACGCGTTCGCCGTTGAGAATGTTTATACCTTGTCAAAGAATTCTTTCATTACCTGATCTTCAATCTTTTTCCTATGCTTCTATGAATGGAGATATTTCTGATTTGAGTCAAGAAAATCTTGTCATTATAGATGAAAATGATTTGGAGATTAGTAATAATGTGGAATCAGGATCAGATTGTATCAATAAGATTAATGGAAAGGTGGATTTAataattgatgattttgaacaTAGTAGTTTGAGAAATTGCGGAAATTTCAGTGACCAAGATATTGAAGCAAATAAAGAATACAAGGTTGCAATAGCAGCATCAACATCAGATTCAATATCTAAGCCGGCACCTATCGATAGACCGGATAATGTGGCTCAAAAAATGGAGATTCTAAGCAAGAAGTTGAACCATGAGATTCCTCATATTGATGTGGATATCAAATACAAAGATGAATTTAACTATGTGAAATATGTACTTGAAGTATCTGGACTCACTAGTAATGAGAGCATTTCAGCATGGCATTCTAAAGACACTCCAGTTGATCCATCACTAtatgaagaaatggaaaatgatCCTAATTTTTGTGCTAATAAAGGGTGTCACATTCTCCATAAAGTTTGGACTCATATGAGTAAGTCATTGTGTTTGAGATCTAAAGTTGGTCAAAAAATAGATGATCATATAAGTAGAGATTTATCAAAAAGTGATGGTTGGTTCAAAAATGTTCAATATAATGGTGAAGATGTTGGTTTAGAAGTGGAAGACATGATTTTTCATGATCTATTGGTGGAAATAATGTCGGACTTTGCTTGTTTATGA 1149 0.3072 MPSVTKEKVNGNFNMSEGVIIVRNVEFSSVCAKDQNNLKQKIENVTGESEKEKIRVGMDSVIHKLPQGQMISDKLKEEILKKLTEPIIIRHKNSIRRIMSLQEPLVSYCQQQETRSPLRMFIPCQRILSLPDLQSFSYASMNGDISDLSQENLVIIDENDLEISNNVESGSDCINKINGKVDLIIDDFEHSSLRNCGNFSDQDIEANKEYKVAIAASTSDSISKPAPIDRPDNVAQKMEILSKKLNHEIPHIDVDIKYKDEFNYVKYVLEVSGLTSNESISAWHSKDTPVDPSLYEEMENDPNFCANKGCHILHKVWTHMSKSLCLRSKVGQKIDDHISRDLSKSDGWFKNVQYNGEDVGLEVEDMIFHDLLVEIMSDFACL 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g04491 382 Pfam Domain of unknown function (DUF4378) 261 302 IPR025486 -
Tsu08g04491 382 Pfam Domain of unknown function (DUF4378) 308 374 IPR025486 -
Tsu08g04491 382 PANTHER DUF4378 DOMAIN PROTEIN 58 149 - -
Tsu08g04491 382 PANTHER PROTEIN TRM32 58 149 IPR044257 -
Tsu08g04491 382 PANTHER PROTEIN TRM32 145 307 IPR044257 -
Tsu08g04491 382 PANTHER DUF4378 DOMAIN PROTEIN 145 307 - -
Tsu08g04491 382 PANTHER DUF4378 DOMAIN PROTEIN 307 382 - -
Tsu08g04491 382 PANTHER PROTEIN TRM32 307 382 IPR044257 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g04491 16 368 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 25.450 1.15e-18 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g04491 - - mtr:MTR_4g021865 491.886