Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g04466 ATGGAACTATCATCAGATTTGCAACAAAACAACAAGAATCAGAAAAGAGGCACCACCACTCATccccaccaccaccaacaacaacaagaatCATCTCCTCCTTCAAATACTCATTCACAGCAACACCACCTTGTGGTCCCTTTTGATGGAAGACCATCACCTTTCATTATGGGCTCCATCTCCAATAACACTTCCACCTCTCCttccaattcatcttcttcctctgctTCAGCTTCTGCAATTGACGCTTCTCTCGCTATTGCTACCAGATCTGAACCTCATTCCACCAACAACAATAACCAAATTCAACAATTCTCTTCTTCCACCACCACCGCTGTCGTCGCTGCAAATCCTCCCAAACGATCCACCAAGGACAGACACACCAAAGTTGACGGCCGTGGCCGGAGAATTCGAATGCCGGCGACATGTGCTGCAAGAGTTTTTCAGTTGACTAGAGAATTAGGCCACAAATCCGACGGTGAAACAATTGAGTGGCTTCTTCAACAAGCGGAGCCGGCGATAATTGCAGCCACTGGAACAGGAACAATTCCCGCGAATTTCTCCACGCTCAACGTTTCACTCAGAAGTAGCGGCTCAACGCTGTCGGCGCCGCCGTCGAAATCAGCTCCTCACAGTTTTCACAGCGCGCTTGCACTGGCTCATCATCCTTATGAAGAAGCTGCGTACCAACACGCGCCACTGTTAGGGTTTCATCCTCATCAACACCAGCAACAGCTCATGAACGCCGATCAAATCGGTGAAGCGCTTTCCAATGAGAATTATATGAGAAAACGTTACAGAGAAGATCTTTTCAAAGACGATAACAACCAAAACGAAAGTGGTGACGGTGATGGTTCTTCTTCTCCTAAAGGTTTCAAAACAAACCATCAACAAGATGGTATAGGAGAAGGTGAAGGTGGAGGAGGAgcttcttcatcctcttcttcAGCTGGAAATTCTATTTCTGGACTTCTTCGACAAACACCGTCGAATATGTTACCGGCAACAGCCATGTGGGCCACGGCAGGGAGTGGAAACACAATATGGATGGTACCGGTGAGTGGTGGCAGCGGAGGAGGAGCGAATACAAATTCAGAGACACAGACACAAAACATGTGGCCTTTTAGTCCTCATCATAATCAACAGTCGTCTCAACAACAAGGAACACCGGCATCTCAATTGCATTTCATGCCTCGGTTCAATGTTCCAACAGGTTCTGGTGGTGGTGTTGAATTTGAAGGTGGACGTGGTTTACAATTGGGTTCATCAGTGTATCATCAACCACCGTCGCAGCATATTGGATTGGCAGTGTCTGATTCAAATTTGGGTATGTTGGCTGCTCTTAATGCCTATACAAGAGCTGCTGCTGGTCATTTCAATGTCGTCAACAATTCTTCTTCAGATCATCAACATAATTCTCAGCAACAACCTAGTCATCATGATCATGAGAGTGCAGAAGATGCTCCTAATAGTAACTCACAATGA 1485 0.4411 MELSSDLQQNNKNQKRGTTTHPHHHQQQQESSPPSNTHSQQHHLVVPFDGRPSPFIMGSISNNTSTSPSNSSSSSASASAIDASLAIATRSEPHSTNNNNQIQQFSSSTTTAVVAANPPKRSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGTGTIPANFSTLNVSLRSSGSTLSAPPSKSAPHSFHSALALAHHPYEEAAYQHAPLLGFHPHQHQQQLMNADQIGEALSNENYMRKRYREDLFKDDNNQNESGDGDGSSSPKGFKTNHQQDGIGEGEGGGGASSSSSSAGNSISGLLRQTPSNMLPATAMWATAGSGNTIWMVPVSGGSGGGANTNSETQTQNMWPFSPHHNQQSSQQQGTPASQLHFMPRFNVPTGSGGGVEFEGGRGLQLGSSVYHQPPSQHIGLAVSDSNLGMLAALNAYTRAAAGHFNVVNNSSSDHQHNSQQQPSHHDHESAEDAPNSNSQ 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g04466 494 PANTHER TRANSCRIPTION FACTOR TCP8 24 492 - -
Tsu08g04466 494 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 24 492 IPR005333 GO:0003700
Tsu08g04466 494 MobiDBLite consensus disorder prediction 271 325 - -
Tsu08g04466 494 MobiDBLite consensus disorder prediction 120 134 - -
Tsu08g04466 494 MobiDBLite consensus disorder prediction 1 16 - -
Tsu08g04466 494 MobiDBLite consensus disorder prediction 308 325 - -
Tsu08g04466 494 MobiDBLite consensus disorder prediction 280 295 - -
Tsu08g04466 494 MobiDBLite consensus disorder prediction 24 43 - -
Tsu08g04466 494 MobiDBLite consensus disorder prediction 351 389 - -
Tsu08g04466 494 MobiDBLite consensus disorder prediction 92 134 - -
Tsu08g04466 494 MobiDBLite consensus disorder prediction 462 494 - -
Tsu08g04466 494 MobiDBLite consensus disorder prediction 92 117 - -
Tsu08g04466 494 Pfam TCP family transcription factor 122 269 IPR017887 -
Tsu08g04466 494 ProSiteProfiles TCP domain profile. 123 177 IPR017887 -
Tsu08g04466 494 MobiDBLite consensus disorder prediction 1 76 - -
Tsu08g04466 494 MobiDBLite consensus disorder prediction 56 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g04466 Tsu-Chr8 62411246 62413973 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g04466 120 379 TCP Transcription Factor Family AT1G35560 50.376 1.27e-62 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Tsu08g04466 TCP 7.2e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g04466 - - adu:107482753 402.519