Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g04463 ATGAGTAACATCTTCATTTTCatgttcttcttcatcattgtcTCCATAGCACCCTCATATGGATATGATCCGTTAGATCCTTTTGGTAACATCACCATCACATGGGATTTCTTGTCTGATAACGATGACACTATCGATGTGAAAGTATCAATATACAATTTCCAACTATTTCGCCACGTGGAAGATCCTGGTTGGAAATTGGGTTGGGCTTGGAAAGGTCATGAAGTGATTTGGGCAATGTTAGGAGCAGAGGCAATGGAACAAGGGAATTGCACAATATTTAGAGGAAAAGATAAACCTCATTGTTGTAAGAAAAAACCAGTTATTATTGATCTCATGCCTGGTGCACCATACAACATGCAATCTGCCAATTGTTGTAAAGGAGGGGTCTTAACATCATTGACACAAGATGTTACCAAACATATTGCATCCTTTCAGATGAATTATATGAAATCATCAACCTCAATTTCGGGTAGCAATTTTAGTATGCCAGAGAATTTTACACTAGGTGTTCCTGGTTATAGCTGCGGCAAACCATTCGAAGTTCCACCAACCAAATTTACCAAAAATGGACACAGGTGGTTGCAAGTCCTAGAAACTTGGAACGTGACATGTACTTACTCGCCATTTTTAGCATCAACTACCCCAAAATGTTGTGTCTCCTTCTCTGCATTCTATCATAGTGACATTGTTCCTTGCCCTTTATACAGCTGTAATTGCCAAGGACAACCAAGAGTAGATTGCATAGATTCTTATAAGACTTCAGTGTTGAAACTTCCACAAGTAAATGATGCAGAACCAGTGCAACAAGAAACTGAAAATGCTCAGTATAACTCAATTCAGTATGGTGATGCTGATGCAATCCAAAATTTGGTTTCTAGTTTGATCTTGCACACAGTAAAAGGTAGCTGA 912 0.3794 MSNIFIFMFFFIIVSIAPSYGYDPLDPFGNITITWDFLSDNDDTIDVKVSIYNFQLFRHVEDPGWKLGWAWKGHEVIWAMLGAEAMEQGNCTIFRGKDKPHCCKKKPVIIDLMPGAPYNMQSANCCKGGVLTSLTQDVTKHIASFQMNYMKSSTSISGSNFSMPENFTLGVPGYSCGKPFEVPPTKFTKNGHRWLQVLETWNVTCTYSPFLASTTPKCCVSFSAFYHSDIVPCPLYSCNCQGQPRVDCIDSYKTSVLKLPQVNDAEPVQQETENAQYNSIQYGDADAIQNLVSSLILHTVKGS 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g04463 303 Pfam COBRA-like protein 47 208 IPR006918 GO:0010215|GO:0031225
Tsu08g04463 303 PANTHER PROTEIN COBRA 8 253 IPR006918 GO:0010215|GO:0031225
Tsu08g04463 303 PIRSF COBRA 1 276 IPR006918 GO:0010215|GO:0031225
Tsu08g04463 303 PANTHER COBRA-LIKE PROTEIN 6 8 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g04463 Tsu-Chr8 62392770 62397012 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g04463 21 274 COBRA Gene Family AT3G29810 48.837 4.08e-83 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g04463 - - lang:109329241 418.313